SNPs Specific to M-83

SNPs Id	Position	Function
Scaffold_2	58069	Unannotated
Scaffold_2	59118	Unannotated
Scaffold_2	189028	Unannotated
Scaffold_2	220150	Unannotated
Scaffold_2	220199	Unannotated
Scaffold_2	220208	Unannotated
Scaffold_2	220448	Unannotated
Scaffold_2	220463	Unannotated
Scaffold_2	227473	Unannotated
Scaffold_2	227485	Unannotated
Scaffold_2	345925	Unannotated
Scaffold_2	499151	Unannotated
Scaffold_2	581865	Unannotated
Scaffold_2	590813	Unannotated
Scaffold_2	680370	Unannotated
Scaffold_2	702676	Unannotated
Scaffold_2	847805	Unannotated
Scaffold_2	1128622	Unannotated
Scaffold_2	1361786	Unannotated
Scaffold_2	1554923	Unannotated
Scaffold_2	1554972	Unannotated
Scaffold_2	1576051	Unannotated
Scaffold_2	2113543	Unannotated
Scaffold_2	2169013	Unannotated
Scaffold_2	2302711	Unannotated
Scaffold_2	2428097	Receptor-like protein 53 (AtRLP53)
Scaffold_2	2447843	Unannotated
Scaffold_2	2584104	Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Tripeptidyl-peptidase II) (TPPII)
Scaffold_2	2708764	Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Tripeptidyl-peptidase II) (TPPII)
Scaffold_4	243953	Unannotated
Scaffold_4	688832	Unannotated
Scaffold_4	858777	Unannotated
Scaffold_4	923823	Unannotated
Scaffold_4	947117	Unannotated
Scaffold_4	1105082	Unannotated
Scaffold_4	1777960	Unannotated
Scaffold_4	2291954	Pentatricopeptide repeat-containing protein At1g32415, mitochondrial
Scaffold_5	178401	Unannotated
Scaffold_5	505206	Unannotated
Scaffold_5	909987	Unannotated
Scaffold_5	968860	Unannotated
Scaffold_5	1267854	Unannotated
Scaffold_5	1713647	Transcription factor GTE4 (Bromodomain-containing protein GTE4) (Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4)
Scaffold_5	1715492	Galactan beta-1,4-galactosyltransferase GALS3 (EC 2.4.1.-) (Beta-1,4-galactan synthase) (Galactan synthase 3)
Scaffold_6	145564	Linoleate 9S-lipoxygenase 6 (EC 1.13.11.58) (Lipoxygenase 1-5) (StLOX1) (lox1:St:3) (Fragment)
Scaffold_6	174674	Unannotated
Scaffold_6	174687	Unannotated
Scaffold_6	174728	Unannotated
Scaffold_6	174759	Unannotated
Scaffold_6	174831	Unannotated
Scaffold_6	360854	Serine/threonine-protein kinase VPS15 (EC 2.7.11.1) (Vacuolar protein sorting-associated protein 15) (AtVPS15)
Scaffold_6	413653	Serine/threonine-protein kinase VPS15 (EC 2.7.11.1) (Vacuolar protein sorting-associated protein 15) (AtVPS15)
Scaffold_6	560141	Unannotated
Scaffold_6	900927	Unannotated
Scaffold_6	900929	Unannotated
Scaffold_6	957163	Unannotated
Scaffold_6	1111237	Unannotated
Scaffold_6	1125368	Unannotated
Scaffold_6	1233694	GDP-mannose transporter GONST3 (Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3)
Scaffold_6	1366402	Unannotated
Scaffold_6	1549421	Unannotated
Scaffold_6	1737810	Unannotated
Scaffold_6	1748661	Unannotated
Scaffold_6	1748663	Unannotated
Scaffold_6	2076508	Unannotated
Scaffold_6	2147044	Unannotated
Scaffold_6	2344590	Unannotated
Scaffold_6	2694252	Unannotated
Scaffold_6	2706757	Unannotated
Scaffold_7	167109	Unannotated
Scaffold_7	175885	Unannotated
Scaffold_7	817452	Unannotated
Scaffold_7	1319819	Unannotated
Scaffold_7	1626346	Unannotated
Scaffold_7	1712940	Unannotated
Scaffold_7	1873578	Unannotated
Scaffold_7	1886205	Unannotated
Scaffold_7	1902696	Unannotated
Scaffold_8	115404	Unannotated
Scaffold_8	142760	Unannotated
Scaffold_8	190728	Unannotated
Scaffold_8	353982	Unannotated
Scaffold_8	485325	Unannotated
Scaffold_8	1050822	Unannotated
Scaffold_8	1103412	Unannotated
Scaffold_8	1360283	Unannotated
Scaffold_8	1361794	Transmembrane 9 superfamily member 2 (Endomembrane protein 8) (Transmembrane nine protein 2) (AtTMN2)
Scaffold_8	1484295	Unannotated
Scaffold_8	1484404	Unannotated
Scaffold_8	1557103	Unannotated
Scaffold_8	1948568	Unannotated
Scaffold_8	2403875	Unannotated
Scaffold_8	2403919	Unannotated
Scaffold_8	2405742	Unannotated
Scaffold_9	245059	Unannotated
Scaffold_9	245081	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase R2 subunit) (Ribonucleotide reductase small subunit)
Scaffold_9	538530	Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleoside-diphosphate reductase R2 subunit) (Ribonucleotide reductase small subunit)
Scaffold_9	608435	Pentatricopeptide repeat-containing protein At2g17670
Scaffold_9	966033	Unannotated
Scaffold_9	1043107	Unannotated
Scaffold_9	1154840	Unannotated
Scaffold_9	1261171	Unannotated
Scaffold_9	1441869	Unannotated
Scaffold_9	1441870	Unannotated
Scaffold_9	1441970	Unannotated
Scaffold_9	1877917	Unannotated
Scaffold_9	1880224	Unannotated
Scaffold_9	1900356	Unannotated
Scaffold_9	2217553	Unannotated
Scaffold_9	2236900	Unannotated
Scaffold_10	287498	Unannotated
Scaffold_10	328007	Unannotated
Scaffold_10	909350	Unannotated
Scaffold_10	1168491	Unannotated
Scaffold_10	1452181	Unannotated
Scaffold_10	1784097	Unannotated
Scaffold_11	190693	Unannotated
Scaffold_11	482314	Unannotated
Scaffold_11	544078	Unannotated
Scaffold_11	734010	Unannotated
Scaffold_11	807480	Unannotated
Scaffold_11	987962	Unannotated
Scaffold_11	1017697	Unannotated
Scaffold_11	1361549	Unannotated
Scaffold_11	1635243	Unannotated
Scaffold_11	1669269	Unannotated
Scaffold_11	1788433	Unannotated
Scaffold_11	1811303	Unannotated
Scaffold_11	1842493	ADP,ATP carrier protein 1, mitochondrial (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1)
Scaffold_11	2083143	Unannotated
Scaffold_11	2246185	Chaperone protein ClpD, chloroplastic (EC 3.6.1.3) (ATP-dependent Clp protease ATP-binding subunit ClpD homolog) (Casein lytic proteinase D) (ERD1 protein) (Protein EARLY RESPONSIVE TO DEHYDRATION 1) (Protein SENESCENCE ASSOCIATED GENE 15)
Scaffold_11	2326725	Unannotated
Scaffold_12	4573	Unannotated
Scaffold_12	186685	Unannotated
Scaffold_12	194731	Unannotated
Scaffold_12	301898	Unannotated
Scaffold_12	358192	Unannotated
Scaffold_12	359327	Unannotated
Scaffold_12	359349	Unannotated
Scaffold_12	454522	Unannotated
Scaffold_12	788452	Unannotated
Scaffold_12	788799	Unannotated
Scaffold_12	1284038	Unannotated
Scaffold_12	1372918	Unannotated
Scaffold_12	1680693	Unannotated
Scaffold_12	1685921	Unannotated
Scaffold_12	2044631	Unannotated
Scaffold_12	2044803	Unannotated
Scaffold_12	2181206	Unannotated
Scaffold_12	2286851	Unannotated
Scaffold_12	3080977	3-oxo-Delta(4,5)-steroid 5-beta-reductase (EC 1.3.1.3) (Delta(4)-3-oxosteroid 5-beta-reductase) (Delta-4,5-steroid 5-beta-reductase) (At5beta-StR) (Progesterone 5-beta-reductase) (5beta-POR) (Protein VEIN PATTERNING 1)
Scaffold_12	3227854	Unannotated
Scaffold_12	3691386	Unannotated
Scaffold_12	3780136	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_12	3871148	Unannotated
Scaffold_12	4014652	Unannotated
Scaffold_12	4014658	Unannotated
Scaffold_13	141403	Unannotated
Scaffold_13	250783	Unannotated
Scaffold_13	263854	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_13	302115	Unannotated
Scaffold_13	915961	Rop guanine nucleotide exchange factor 1 (AtRopGEF1) (Kinase partner protein-like) (KPP-like) (Rho of plants guanine nucleotide exchange factor 1)
Scaffold_13	916061	Unannotated
Scaffold_13	963758	Unannotated
Scaffold_13	1005825	Unannotated
Scaffold_13	1066657	Unannotated
Scaffold_13	1229425	Unannotated
Scaffold_13	1797319	Unannotated
Scaffold_13	1822229	Unannotated
Scaffold_13	1822561	Unannotated
Scaffold_13	2085706	Unannotated
Scaffold_13	2245823	Unannotated
Scaffold_13	2401510	Unannotated
Scaffold_13	2656575	Unannotated
Scaffold_13	2666648	Unannotated
Scaffold_13	2737688	Unannotated
Scaffold_13	2814788	Unannotated
Scaffold_13	2815576	Unannotated
Scaffold_13	3101521	Unannotated
Scaffold_13	3101522	Unannotated
Scaffold_13	3269437	Probable pectate lyase 1 (EC 4.2.2.2) (Pectate lyase A1)
Scaffold_13	3375807	Unannotated
Scaffold_13	3419539	Unannotated
Scaffold_13	3505453	LRR receptor-like serine/threonine-protein kinase GSO1 (EC 2.7.11.1) (Protein GASSHO 1) (Protein SCHENGEN 3)
Scaffold_13	3506966	Unannotated
Scaffold_13	3508763	Unannotated
Scaffold_14	75954	Unannotated
Scaffold_14	77938	Unannotated
Scaffold_14	105123	Unannotated
Scaffold_14	586938	Unannotated
Scaffold_14	724915	Unannotated
Scaffold_14	1356306	Unannotated
Scaffold_14	1402054	Unannotated
Scaffold_14	1721760	Unannotated
Scaffold_14	1940920	Unannotated
Scaffold_14	1997891	Unannotated
Scaffold_14	2010051	F-box/kelch-repeat protein At5g60570
Scaffold_14	2010063	Unannotated
Scaffold_15	256342	Unannotated
Scaffold_15	256351	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_15	266131	Unannotated
Scaffold_15	428697	Unannotated
Scaffold_15	546328	Unannotated
Scaffold_15	726794	Unannotated
Scaffold_15	859275	Unannotated
Scaffold_15	863094	Unannotated
Scaffold_15	1224702	Unannotated
Scaffold_15	1462910	Unannotated
Scaffold_15	1831017	Unannotated
Scaffold_15	2200603	Unannotated
Scaffold_15	2213022	Unannotated
Scaffold_15	2393152	Unannotated
Scaffold_15	2393610	Unannotated
Scaffold_15	2502444	Unannotated
Scaffold_16	109420	Unannotated
Scaffold_16	206829	Unannotated
Scaffold_16	366870	Unannotated
Scaffold_16	400598	Unannotated
Scaffold_16	845927	Unannotated
Scaffold_16	853475	Unannotated
Scaffold_16	853477	Unannotated
Scaffold_16	865260	Unannotated
Scaffold_16	1299646	Unannotated
Scaffold_16	1309491	Unannotated
Scaffold_16	1515913	Unannotated
Scaffold_16	1871457	Unannotated
Scaffold_16	1914126	Unannotated
Scaffold_16	1915448	Unannotated
Scaffold_16	1934774	Unannotated
Scaffold_17	282147	Unannotated
Scaffold_17	600452	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_17	677468	Unannotated
Scaffold_17	967397	Unannotated
Scaffold_17	971909	Unannotated
Scaffold_17	972132	Unannotated
Scaffold_17	1025551	Unannotated
Scaffold_17	1068020	Unannotated
Scaffold_17	1068021	Unannotated
Scaffold_17	1360678	Serine/threonine-protein kinase BRI1-like 1 (EC 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
Scaffold_17	1360679	Unannotated
Scaffold_17	1386717	Unannotated
Scaffold_17	1402666	Unannotated
Scaffold_17	1402702	Unannotated
Scaffold_17	1445767	Unannotated
Scaffold_17	1816092	Unannotated
Scaffold_18	115981	Unannotated
Scaffold_18	116055	Unannotated
Scaffold_18	350343	Unannotated
Scaffold_18	630991	Unannotated
Scaffold_18	1574908	Unannotated
Scaffold_18	1726713	Unannotated
Scaffold_18	1924151	Unannotated
Scaffold_18	1955281	Chloride channel protein CLC-f (AtCLC-f) (CBS domain-containing protein CBSCLC1)
Scaffold_18	2009448	Unannotated
Scaffold_18	2078293	Unannotated
Scaffold_18	2607594	Unannotated
Scaffold_19	18736	Unannotated
Scaffold_19	190207	Unannotated
Scaffold_19	531989	Unannotated
Scaffold_19	591074	Unannotated
Scaffold_19	676145	Unannotated
Scaffold_19	1707709	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic (Protein MATERNAL EFFECT EMBRYO ARREST 40)
Scaffold_19	1914078	Unannotated
Scaffold_19	1924384	Unannotated
Scaffold_19	1977478	Phospholipase A I (AtPLA1) (EC 3.1.1.-)
Scaffold_19	1979323	Unannotated
Scaffold_19	2084295	Unannotated
Scaffold_20	18628	Unannotated
Scaffold_20	188358	Unannotated
Scaffold_20	269582	Unannotated
Scaffold_20	269639	Unannotated
Scaffold_20	273281	Unannotated
Scaffold_20	536180	Unannotated
Scaffold_20	680583	Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 (EC 2.7.10.1) (EC 2.7.11.1) (Protein EVERSHED) (Protein SUPPRESSOR OF BIR1-1)
Scaffold_20	738299	Unannotated
Scaffold_20	1044956	Unannotated
Scaffold_20	1045228	Unannotated
Scaffold_20	2052007	Unannotated
Scaffold_20	2227560	Unannotated
Scaffold_21	168020	Unannotated
Scaffold_21	225584	Unannotated
Scaffold_21	297933	Unannotated
Scaffold_21	525062	Unannotated
Scaffold_21	668377	Unannotated
Scaffold_21	679824	Unannotated
Scaffold_21	679833	Unannotated
Scaffold_21	936940	Unannotated
Scaffold_21	1641034	Unannotated
Scaffold_21	1641036	Unannotated
Scaffold_21	1744708	LRR receptor kinase SERK2 (EC 2.7.11.1) (BRI1-associated receptor kinase 1 homolog 5) (OsBAK1-5) (Somatic embryogenesis receptor kinase 4) (OsSERK4)
Scaffold_21	1910341	Unannotated
Scaffold_21	2230445	Probable galacturonosyltransferase-like 1 (EC 2.4.1.-) (Protein GAOLAOZHUANGREN 1) (Protein PARVUS)
Scaffold_22	164866	Unannotated
Scaffold_22	574699	Unannotated
Scaffold_22	639490	Unannotated
Scaffold_22	656965	Unannotated
Scaffold_22	836859	Unannotated
Scaffold_22	880374	Unannotated
Scaffold_22	1267379	Unannotated
Scaffold_22	1306187	Unannotated
Scaffold_22	1347589	Unannotated
Scaffold_22	1406285	Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (EC 1.14.19.-)
Scaffold_22	1433049	Monothiol glutaredoxin-S17 (AtGrxS17)
Scaffold_22	1495436	Unannotated
Scaffold_22	1534890	Unannotated
Scaffold_22	1567208	Unannotated
Scaffold_22	1567224	Unannotated
Scaffold_22	1586262	Unannotated
Scaffold_22	1725793	Unannotated
Scaffold_22	1873478	Unannotated
Scaffold_22	1873479	Unannotated
Scaffold_22	2065719	Unannotated
Scaffold_22	2066717	Unannotated
Scaffold_22	2097017	Unannotated
Scaffold_22	2145412	Unannotated
Scaffold_22	2208946	Unannotated
Scaffold_22	2422913	Unannotated
Scaffold_23	292900	Receptor-like kinase TMK4 (EC 2.7.11.1) (BAK1-associating receptor-like kinase 1) (Leucine-rich repeat receptor-like kinases TMK4) (Transmembrane kinase 4)
Scaffold_23	342281	Receptor-like kinase TMK4 (EC 2.7.11.1) (BAK1-associating receptor-like kinase 1) (Leucine-rich repeat receptor-like kinases TMK4) (Transmembrane kinase 4)
Scaffold_23	465382	Unannotated
Scaffold_23	1055698	Unannotated
Scaffold_23	1183050	Unannotated
Scaffold_23	1204334	Unannotated
Scaffold_23	1204335	Unannotated
Scaffold_23	1467540	Unannotated
Scaffold_23	1619132	Unannotated
Scaffold_23	1687324	Unannotated
Scaffold_23	1687652	Unannotated
Scaffold_23	1828894	Pentatricopeptide repeat-containing protein At4g20770
Scaffold_24	203046	Unannotated
Scaffold_24	358003	Pentatricopeptide repeat-containing protein At1g80270, mitochondrial
Scaffold_24	358004	Pentatricopeptide repeat-containing protein At1g80270, mitochondrial
Scaffold_24	621106	Unannotated
Scaffold_24	639084	Unannotated
Scaffold_24	751237	Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (Zinc finger protein STOP1)
Scaffold_24	864158	Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 (Zinc finger protein STOP1)
Scaffold_24	943264	Unannotated
Scaffold_24	943800	Unannotated
Scaffold_24	1062729	Unannotated
Scaffold_24	1130257	Unannotated
Scaffold_24	1156181	Unannotated
Scaffold_24	1300816	NF-X1-type zinc finger protein NFXL2 (AtNFXL2) (EC 2.3.2.-) (Protein EARLY BIRD)
Scaffold_24	1537722	Unannotated
Scaffold_24	1570857	Unannotated
Scaffold_24	1760975	Transcription factor bHLH14 (Basic helix-loop-helix protein 14) (AtbHLH14) (bHLH 14) (Transcription factor EN 33) (bHLH transcription factor bHLH014)
Scaffold_24	1967150	Unannotated
Scaffold_24	2042534	Unannotated
Scaffold_24	2115767	Unannotated
Scaffold_24	2211131	Unannotated
Scaffold_25	185394	Vacuolar-sorting receptor 1 (80 kDa proaleurein-binding protein) (BP-80)
Scaffold_25	261559	Unannotated
Scaffold_25	394108	Unannotated
Scaffold_25	553728	Unannotated
Scaffold_25	654809	Unannotated
Scaffold_25	654810	Glycogen synthase kinase-3 homolog MsK-3 (EC 2.7.11.1)
Scaffold_25	751217	Unannotated
Scaffold_25	806534	Unannotated
Scaffold_25	806539	Potassium transporter 8 (AtHAK8) (AtPOT8)
Scaffold_25	1045739	Unannotated
Scaffold_25	1110834	Unannotated
Scaffold_25	1212965	Unannotated
Scaffold_25	1221174	Unannotated
Scaffold_25	1290856	Unannotated
Scaffold_25	1312630	Unannotated
Scaffold_25	1312638	Unannotated
Scaffold_25	1318460	Unannotated
Scaffold_25	1398064	Unannotated
Scaffold_25	1511071	Probable protein phosphatase 2C 4 (AtPP2C04) (EC 3.1.3.16) (Protein POLTERGEIST-LIKE 5) (Protein phosphatase 2C PLL5) (PP2C PLL5)
Scaffold_25	1609083	Unannotated
Scaffold_25	1734532	Unannotated
Scaffold_26	1916	Unannotated
Scaffold_26	332780	Unannotated
Scaffold_26	609540	Unannotated
Scaffold_26	738540	Unannotated
Scaffold_26	740279	Unannotated
Scaffold_26	741307	Unannotated
Scaffold_26	1029264	Unannotated
Scaffold_26	1269279	Unannotated
Scaffold_26	1280891	Unannotated
Scaffold_26	1322581	Unannotated
Scaffold_26	1367577	Unannotated
Scaffold_26	1380382	Unannotated
Scaffold_26	1750759	Unannotated
Scaffold_26	1766253	Unannotated
Scaffold_26	1810683	Filament-like plant protein (LeFPP) (Fragment)
Scaffold_26	1816379	Unannotated
Scaffold_26	1851914	Unannotated
Scaffold_26	1948845	Putative clathrin assembly protein At2g25430
Scaffold_26	1999629	Unannotated
Scaffold_26	2009335	Phospholipase A1-Ibeta2, chloroplastic (EC 3.1.1.-)
Scaffold_26	2030580	Unannotated
Scaffold_27	495358	Uncharacterized TPR repeat-containing protein At1g05150
Scaffold_27	548972	Unannotated
Scaffold_27	730424	Unannotated
Scaffold_27	792447	Eukaryotic initiation factor 4A-1 (eIF-4A-1) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A-1) (DEAD-box ATP-dependent RNA helicase 4)
Scaffold_27	807249	Unannotated
Scaffold_27	817332	Unannotated
Scaffold_27	817905	Unannotated
Scaffold_27	989101	Unannotated
Scaffold_27	1027456	Unannotated
Scaffold_27	1193743	Unannotated
Scaffold_27	1223773	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110)
Scaffold_27	1349226	Unannotated
Scaffold_27	1436286	Unannotated
Scaffold_27	1550907	FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16)
Scaffold_27	1558969	FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16)
Scaffold_27	1571597	Unannotated
Scaffold_27	1808293	Unannotated
Scaffold_28	67483	Unannotated
Scaffold_28	150339	Unannotated
Scaffold_28	369694	Unannotated
Scaffold_28	453305	Unannotated
Scaffold_28	464859	Unannotated
Scaffold_28	464871	Protein EXORDIUM-like 3
Scaffold_28	496553	Unannotated
Scaffold_28	573289	Unannotated
Scaffold_28	575682	Unannotated
Scaffold_28	938779	Unannotated
Scaffold_28	1592914	Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.4.19.12) (Deubiquitinating enzyme 2) (AtUBP2) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2)
Scaffold_28	1728353	Probable polyamine oxidase 4 (AtPAO4) (EC 1.5.3.16) (Amine oxidase 2)
Scaffold_28	1782314	Unannotated
Scaffold_29	196255	Unannotated
Scaffold_29	198860	Unannotated
Scaffold_29	291959	Unannotated
Scaffold_29	318816	Unannotated
Scaffold_29	318885	Unannotated
Scaffold_29	320717	Unannotated
Scaffold_29	344412	Unannotated
Scaffold_29	503760	Glycerophosphodiester phosphodiesterase GDPD2 (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase 2) (AtGDPD2)
Scaffold_29	597583	Unannotated
Scaffold_29	597584	Unannotated
Scaffold_29	599943	Unannotated
Scaffold_29	787611	Unannotated
Scaffold_29	908150	Unannotated
Scaffold_29	1199722	Unannotated
Scaffold_29	1309427	Unannotated
Scaffold_29	1342006	Pentatricopeptide repeat-containing protein At2g15690, mitochondrial
Scaffold_29	1483017	Unannotated
Scaffold_29	1496595	Unannotated
Scaffold_29	1509581	Unannotated
Scaffold_29	1599978	Unannotated
Scaffold_30	135356	Xyloglucan glycosyltransferase 4 (EC 2.4.1.-) (Cellulose synthase-like protein C4) (AtCslC4) (Xyloglucan synthase 4)
Scaffold_30	351277	Unannotated
Scaffold_30	351278	Unannotated
Scaffold_30	511886	Unannotated
Scaffold_30	779361	Unannotated
Scaffold_30	816946	Unannotated
Scaffold_30	1210459	DEAD-box ATP-dependent RNA helicase 53, mitochondrial (EC 3.6.4.13)
Scaffold_30	1647138	Unannotated
Scaffold_30	1818693	Unannotated
Scaffold_30	1872376	Unannotated
Scaffold_30	1873774	Unannotated
Scaffold_30	1874072	Unannotated
Scaffold_31	42455	Unannotated
Scaffold_31	644581	Unannotated
Scaffold_31	653670	Unannotated
Scaffold_31	661206	Unannotated
Scaffold_31	690218	Unannotated
Scaffold_31	796235	Unannotated
Scaffold_31	822601	Unannotated
Scaffold_31	867438	Unannotated
Scaffold_31	1214417	Unannotated
Scaffold_31	1564305	Unannotated
Scaffold_32	48321	Unannotated
Scaffold_32	136591	Unannotated
Scaffold_32	585631	Unannotated
Scaffold_32	610735	Unannotated
Scaffold_32	979584	Unannotated
Scaffold_32	983368	Unannotated
Scaffold_32	1171117	Unannotated
Scaffold_32	1277759	Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 (SDH) (EC 1.-.-.-)
Scaffold_33	103157	Kinesin-like protein KIN-13B (AtKINESIN-13B) (AtKIN13B)
Scaffold_33	221192	Unannotated
Scaffold_33	898179	Unannotated
Scaffold_33	947150	Unannotated
Scaffold_33	968559	Unannotated
Scaffold_33	1010818	Unannotated
Scaffold_33	1012074	Unannotated
Scaffold_33	1058068	Unannotated
Scaffold_33	1064691	Unannotated
Scaffold_33	1065783	Unannotated
Scaffold_33	1066525	Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_33	1178639	Unannotated
Scaffold_33	1613725	Unannotated
Scaffold_33	1652458	Unannotated
Scaffold_33	1723218	Unannotated
Scaffold_33	1820971	Unannotated
Scaffold_33	1900657	Unannotated
Scaffold_33	1901233	Unannotated
Scaffold_34	504224	Unannotated
Scaffold_34	950213	Unannotated
Scaffold_34	950222	Unannotated
Scaffold_34	1156964	Unannotated
Scaffold_34	1458591	Unannotated
Scaffold_34	1564689	Unannotated
Scaffold_34	1790813	Unannotated
Scaffold_34	1961670	Unannotated
Scaffold_35	338823	Phosphatidylinositol 4-kinase alpha 1 (PI4-kinase alpha 1) (PtdIns-4-kinase alpha 1) (EC 2.7.1.67) (Phosphatidylinositol 4-OH kinase alpha1) (AtPI4Kalpha1) (PI-4Kalpha1)
Scaffold_35	629994	Unannotated
Scaffold_35	663304	Unannotated
Scaffold_35	740994	Unannotated
Scaffold_35	835227	Unannotated
Scaffold_35	1103759	Unannotated
Scaffold_35	1232415	Unannotated
Scaffold_35	1266008	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 (OsLecRK2) (EC 2.7.11.1)
Scaffold_35	1267169	Unannotated
Scaffold_35	1419247	Methylthioribose kinase (AtMTK) (MTR kinase) (EC 2.7.1.100)
Scaffold_35	1501851	Unannotated
Scaffold_35	1524975	Unannotated
Scaffold_35	1764431	Probable methyltransferase PMT26 (EC 2.1.1.-)
Scaffold_36	75101	Unannotated
Scaffold_36	75102	Unannotated
Scaffold_36	402034	Unannotated
Scaffold_36	493990	Unannotated
Scaffold_36	1256591	Unannotated
Scaffold_36	1423061	Unannotated
Scaffold_36	1425582	Unannotated
Scaffold_36	1783480	Unannotated
Scaffold_36	1826374	Unannotated
Scaffold_36	1829056	Unannotated
Scaffold_36	1829063	Unannotated
Scaffold_36	1831782	Unannotated
Scaffold_37	290718	Unannotated
Scaffold_37	400084	Unannotated
Scaffold_37	465789	Unannotated
Scaffold_37	583567	Unannotated
Scaffold_37	815771	Unannotated
Scaffold_37	1016117	Unannotated
Scaffold_37	1024983	Unannotated
Scaffold_37	1025059	Unannotated
Scaffold_37	1316536	Unannotated
Scaffold_37	1434282	Unannotated
Scaffold_37	1557223	Unannotated
Scaffold_38	531545	Unannotated
Scaffold_38	635091	Lipoxygenase 6, chloroplastic (AtLOX6) (EC 1.13.11.12)
Scaffold_38	673605	Unannotated
Scaffold_38	794665	Unannotated
Scaffold_38	937313	Unannotated
Scaffold_38	1198586	Unannotated
Scaffold_38	1236269	Unannotated
Scaffold_38	1364935	Unannotated
Scaffold_38	1470457	Unannotated
Scaffold_38	1677482	Unannotated
Scaffold_38	1881404	Unannotated
Scaffold_38	2129055	Unannotated
Scaffold_38	2233034	Unannotated
Scaffold_40	97808	Unannotated
Scaffold_40	140870	Unannotated
Scaffold_40	140874	Unannotated
Scaffold_40	317121	Unannotated
Scaffold_40	345102	Unannotated
Scaffold_40	505489	Unannotated
Scaffold_40	513485	Kaempferol 3-O-beta-D-galactosyltransferase (F3GalTase) (EC 2.4.1.234)
Scaffold_40	613408	Unannotated
Scaffold_40	638035	Unannotated
Scaffold_40	681099	Unannotated
Scaffold_40	692859	Unannotated
Scaffold_40	807894	Unannotated
Scaffold_40	923135	Unannotated
Scaffold_40	1163228	Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D (Phosphatidylinositol 3-phosphate 5-kinase) (EC 2.7.1.150) (Phosphatidylinositol 3-phosphate 5-kinase type III) (PIPkin-III) (Type III PIP kinase) (Protein FORMS APLOID AND BINUCLEATE CELLS 1D)
Scaffold_40	1167436	Unannotated
Scaffold_40	1167437	Unannotated
Scaffold_40	1367795	Scarecrow-like protein 13 (AtSCL13) (GRAS family protein 24) (AtGRAS-24)
Scaffold_40	1367796	Unannotated
Scaffold_40	1404719	Unannotated
Scaffold_40	1409130	Unannotated
Scaffold_41	764157	Unannotated
Scaffold_41	788008	Unannotated
Scaffold_41	798106	Unannotated
Scaffold_41	932760	Unannotated
Scaffold_41	1385908	Unannotated
Scaffold_41	1753523	Unannotated
Scaffold_41	1792742	Unannotated
Scaffold_41	1792823	Unannotated
Scaffold_42	60358	Unannotated
Scaffold_42	99937	Unannotated
Scaffold_42	100037	Unannotated
Scaffold_42	163314	Unannotated
Scaffold_42	304029	Unannotated
Scaffold_42	305349	Unannotated
Scaffold_42	305350	Unannotated
Scaffold_42	701156	Unannotated
Scaffold_42	812674	Unannotated
Scaffold_42	862944	Unannotated
Scaffold_42	1091718	Unannotated
Scaffold_42	1340551	Unannotated
Scaffold_42	1393147	Unannotated
Scaffold_42	1433325	Unannotated
Scaffold_42	1433326	Unannotated
Scaffold_42	1469441	Pectinesterase 2.1 (PE 2.1) (EC 3.1.1.11) (Pectin methylesterase 2.1)
Scaffold_43	50089	Plasma membrane ATPase (EC 7.1.2.1) (Proton pump)
Scaffold_43	103331	Probable mitochondrial adenine nucleotide transporter BTL3 (Adenine nucleotide transporter BT1-like protein 3)
Scaffold_43	258480	Unannotated
Scaffold_43	316740	Unannotated
Scaffold_43	347090	APO protein 1, chloroplastic (Accumulation of photosystem I protein 1) (Protein ACCUMULATION OF PHOTOSYSTEM ONE 1)
Scaffold_43	366712	Unannotated
Scaffold_43	592750	Unannotated
Scaffold_43	628136	Unannotated
Scaffold_43	769151	Unannotated
Scaffold_43	769159	Unannotated
Scaffold_43	784029	Unannotated
Scaffold_43	1553069	Unannotated
Scaffold_43	1754321	Very-long-chain enoyl-CoA reductase (EC 1.3.1.93) (Enoyl-CoA reductase) (AtECR) (Protein ECERIFERUM 10) (Synaptic glycoprotein SC2-like protein)
Scaffold_43	1782380	Unannotated
Scaffold_43	1853926	Unannotated
Scaffold_44	33631	Unannotated
Scaffold_44	632048	Unannotated
Scaffold_44	649516	Unannotated
Scaffold_44	905343	Unannotated
Scaffold_44	921289	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
Scaffold_44	926101	Unannotated
Scaffold_44	948818	Unannotated
Scaffold_44	975003	Unannotated
Scaffold_44	1206576	Unannotated
Scaffold_44	1466826	Unannotated
Scaffold_44	1505458	LRR receptor-like serine/threonine-protein kinase FEI 1 (EC 2.7.11.1)
Scaffold_44	1563710	Unannotated
Scaffold_45	68981	Unannotated
Scaffold_45	277861	Unannotated
Scaffold_45	387897	Unannotated
Scaffold_45	918276	Unannotated
Scaffold_45	975249	Unannotated
Scaffold_45	986811	Unannotated
Scaffold_46	517075	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic (Protein PROTON GRADIENT REGULATION 3)
Scaffold_46	545810	Unannotated
Scaffold_46	551572	Unannotated
Scaffold_46	551573	Unannotated
Scaffold_46	570048	Unannotated
Scaffold_46	570395	Unannotated
Scaffold_46	588428	Unannotated
Scaffold_46	1095514	Unannotated
Scaffold_46	1100274	Unannotated
Scaffold_46	1116846	Unannotated
Scaffold_46	1166265	Unannotated
Scaffold_46	1266209	Unannotated
Scaffold_46	1509845	Unannotated
Scaffold_46	1615378	Delta(8)-fatty-acid desaturase 2 (EC 1.14.19.29) (Delta(8)-sphingolipid desaturase 2) (Sphingoid long-chain base desaturase 2) (Sphingoid LCB desaturase 2) (Sphingolipid 8-(E/Z)-desaturase 2)
Scaffold_46	1788873	Cullin-3A (AtCUL3a)
Scaffold_46	1849541	Unannotated
Scaffold_46	2045252	Unannotated
Scaffold_47	204222	Unannotated
Scaffold_47	318800	Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (EC 2.7.11.1)
Scaffold_47	549936	Unannotated
Scaffold_47	553686	Unannotated
Scaffold_47	905280	Unannotated
Scaffold_47	972879	Unannotated
Scaffold_47	998096	Unannotated
Scaffold_47	1033298	Unannotated
Scaffold_47	1144141	Unannotated
Scaffold_47	1146179	Unannotated
Scaffold_47	1242119	Myosin-1 (AtATM1)
Scaffold_47	1357664	Myosin-1 (AtATM1)
Scaffold_47	1357704	Unannotated
Scaffold_47	1596094	Probable carotenoid cleavage dioxygenase 4, chloroplastic (AtCCD4) (EC 1.14.99.-) (AtNCED4)
Scaffold_47	1629188	Unannotated
Scaffold_47	1700248	Uncharacterized protein At5g39865
Scaffold_47	1852209	Unannotated
Scaffold_48	288689	Sugar transport protein 14 (Hexose transporter 14)
Scaffold_48	326713	Unannotated
Scaffold_48	386018	Unannotated
Scaffold_48	738810	Unannotated
Scaffold_48	899700	Unannotated
Scaffold_48	899701	Unannotated
Scaffold_48	1106905	E3 ubiquitin-protein ligase PRT6 (EC 2.3.2.27) (Protein GREENING AFTER EXTENDED DARKNESS 1) (Protein PROTEOLYSIS 6) (RING-type E3 ubiquitin transferase PRT6)
Scaffold_48	1111619	Unannotated
Scaffold_48	1111625	50S ribosomal protein L3, chloroplastic (Chloroplastic large ribosomal subunit protein uL3c)
Scaffold_48	1111682	Unannotated
Scaffold_48	1759305	Unannotated
Scaffold_48	2018386	Unannotated
Scaffold_48	2018387	Unannotated
Scaffold_48	2357957	Unannotated
Scaffold_48	2485376	Unannotated
Scaffold_49	274216	Unannotated
Scaffold_49	335354	Unannotated
Scaffold_49	430860	Unannotated
Scaffold_49	431749	NADPH-dependent pterin aldehyde reductase (EC 1.1.1.-)
Scaffold_49	555026	Unannotated
Scaffold_49	596399	Unannotated
Scaffold_49	663811	Unannotated
Scaffold_49	896906	Unannotated
Scaffold_49	1102858	Probable serine/threonine-protein kinase At1g01540 (EC 2.7.11.1)
Scaffold_49	1458660	Unannotated
Scaffold_49	1501219	Cationic amino acid transporter 5
Scaffold_49	1501220	Cationic amino acid transporter 5
Scaffold_49	1970674	Unannotated
Scaffold_50	57396	Unannotated
Scaffold_50	84731	Unannotated
Scaffold_50	264105	Unannotated
Scaffold_50	264114	Unannotated
Scaffold_50	348660	Unannotated
Scaffold_50	547244	Unannotated
Scaffold_50	767673	Unannotated
Scaffold_50	774502	Unannotated
Scaffold_50	826001	Sucrose-phosphatase 2 (NtSPP2) (EC 3.1.3.24)
Scaffold_50	933173	Unannotated
Scaffold_50	933231	Unannotated
Scaffold_50	1287764	Unannotated
Scaffold_50	1316339	Probable E3 ubiquitin-protein ligase LUL4 (EC 2.3.2.27) (Probable RING-type E3 ubiquitin transferase LUL4) (Protein LOG2-LIKE UBIQUITIN LIGASE 4) (RING finger protein 208)
Scaffold_50	1543127	Unannotated
Scaffold_50	1572539	Unannotated
Scaffold_50	1635941	Unannotated
Scaffold_50	1691477	Unannotated
Scaffold_51	23001	Unannotated
Scaffold_51	365555	Unannotated
Scaffold_51	383045	Unannotated
Scaffold_51	383046	Unannotated
Scaffold_51	441508	Protein HIRA (Histone regulator protein)
Scaffold_51	993655	Unannotated
Scaffold_51	1278628	Unannotated
Scaffold_51	1601508	Unannotated
Scaffold_51	1674799	Protein translocase subunit SecA, chloroplastic (EC 7.4.2.4)
Scaffold_51	1725065	Unannotated
Scaffold_51	1755462	Unannotated
Scaffold_51	1931321	Unannotated
Scaffold_52	139524	Unannotated
Scaffold_52	313224	Unannotated
Scaffold_52	429725	Unannotated
Scaffold_52	487848	Unannotated
Scaffold_52	1148029	Unannotated
Scaffold_52	1290390	Unannotated
Scaffold_52	1544299	Unannotated
Scaffold_52	1596681	Unannotated
Scaffold_52	1602244	Unannotated
Scaffold_52	1715153	Unannotated
Scaffold_53	199146	Unannotated
Scaffold_53	199179	Unannotated
Scaffold_53	932263	Unannotated
Scaffold_53	972183	Sucrose synthase (EC 2.4.1.13) (Nodulin-100) (N-100) (Sucrose-UDP glucosyltransferase)
Scaffold_53	1240527	Unannotated
Scaffold_53	1328218	ATP-dependent helicase BRM (EC 3.6.4.12) (Protein BRAHMA) (AtBRM) (Protein CHROMATIN REMODELING 2) (AtCHR2)
Scaffold_53	1328249	Unannotated
Scaffold_53	1376391	60S ribosomal protein L18a-2
Scaffold_53	1804273	Probable serine/threonine-protein kinase PBL5 (EC 2.7.11.1) (PBS1-like protein 5) (Serine/threonine-protein kinase RLCKVII)
Scaffold_54	176551	Probable serine/threonine-protein kinase PBL5 (EC 2.7.11.1) (PBS1-like protein 5) (Serine/threonine-protein kinase RLCKVII)
Scaffold_54	552922	Unannotated
Scaffold_54	915476	Unannotated
Scaffold_54	1263494	Unannotated
Scaffold_54	1455244	Unannotated
Scaffold_54	1485133	Unannotated
Scaffold_55	198309	Unannotated
Scaffold_55	199364	Unannotated
Scaffold_55	200197	Unannotated
Scaffold_55	233455	Unannotated
Scaffold_55	267328	Unannotated
Scaffold_55	286653	Unannotated
Scaffold_55	853492	Unannotated
Scaffold_55	920315	Probable LRR receptor-like serine/threonine-protein kinase At1g74360 (EC 2.7.11.1)
Scaffold_55	936310	Unannotated
Scaffold_55	951566	Unannotated
Scaffold_55	953763	Unannotated
Scaffold_55	978000	Unannotated
Scaffold_55	1001445	Ribonuclease III domain-containing protein RNC1, chloroplastic (Chloroplast ribonuclease III domain protein)
Scaffold_55	1002212	Unannotated
Scaffold_55	1017720	Unannotated
Scaffold_55	1040821	Unannotated
Scaffold_55	1229238	Unannotated
Scaffold_55	1248397	Unannotated
Scaffold_56	97731	Unannotated
Scaffold_56	168865	Unannotated
Scaffold_56	457940	Unannotated
Scaffold_56	561031	Unannotated
Scaffold_56	896551	Unannotated
Scaffold_56	896553	Unannotated
Scaffold_56	1085353	Unannotated
Scaffold_56	1085979	Unannotated
Scaffold_56	1161654	Unannotated
Scaffold_56	1217433	Unannotated
Scaffold_56	1249847	Unannotated
Scaffold_56	1291118	Unannotated
Scaffold_57	154696	Unannotated
Scaffold_57	170484	Unannotated
Scaffold_57	233276	Unannotated
Scaffold_57	595887	Unannotated
Scaffold_57	858897	Unannotated
Scaffold_57	863812	Unannotated
Scaffold_57	1090011	Unannotated
Scaffold_57	1527342	Unannotated
Scaffold_57	1528284	Unannotated
Scaffold_57	1688943	Unannotated
Scaffold_58	297328	Transcription termination factor MTERF9, chloroplastic (Mitochondrial transcription termination factor 9) (Protein TWIRT1)
Scaffold_58	753983	Unannotated
Scaffold_58	1082044	Unannotated
Scaffold_59	124935	Unannotated
Scaffold_59	126166	Pectinesterase 1 (PE 1) (EC 3.1.1.11) (Pectin methylesterase)
Scaffold_59	128311	Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)
Scaffold_59	128719	Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial (Glu-AdT subunit B) (EC 6.3.5.-)
Scaffold_59	289408	Unannotated
Scaffold_59	533674	Unannotated
Scaffold_59	566313	Unannotated
Scaffold_59	814466	Unannotated
Scaffold_59	824384	Unannotated
Scaffold_59	1238064	Unannotated
Scaffold_59	1377254	Unannotated
Scaffold_59	1441811	Unannotated
Scaffold_60	320908	Unannotated
Scaffold_60	328431	Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
Scaffold_60	370780	Unannotated
Scaffold_60	672855	Unannotated
Scaffold_60	1326649	Unannotated
Scaffold_60	1498087	Unannotated
Scaffold_61	11830	Unannotated
Scaffold_61	569733	Unannotated
Scaffold_61	717903	Unannotated
Scaffold_61	752823	Unannotated
Scaffold_61	1107998	Unannotated
Scaffold_61	1175693	Unannotated
Scaffold_61	1224546	Unannotated
Scaffold_61	1516819	Unannotated
Scaffold_62	2142	Unannotated
Scaffold_62	102876	Unannotated
Scaffold_62	102964	Unannotated
Scaffold_62	292862	Unannotated
Scaffold_62	327622	Unannotated
Scaffold_62	516297	Mediator of RNA polymerase II transcription subunit 14 (Protein STRUWWELPETER) (AtSWP)
Scaffold_62	801109	Unannotated
Scaffold_62	801112	Unannotated
Scaffold_62	801134	Unannotated
Scaffold_62	1303424	Unannotated
Scaffold_62	1545370	Unannotated
Scaffold_63	87440	Unannotated
Scaffold_63	314231	Unannotated
Scaffold_63	322230	Unannotated
Scaffold_63	506878	Unannotated
Scaffold_63	995937	Unannotated
Scaffold_63	1122357	Unannotated
Scaffold_63	1313203	Unannotated
Scaffold_63	1535472	Unannotated
Scaffold_63	1536067	Unannotated
Scaffold_63	1644869	Unannotated
Scaffold_63	1686308	Unannotated
Scaffold_64	39068	DeSI-like protein At4g17486 (EC 3.4.-.-)
Scaffold_64	60157	Sugar transport protein 13 (Hexose transporter 13) (Multicopy suppressor of snf4 deficiency protein 1)
Scaffold_64	84725	Unannotated
Scaffold_64	97440	Unannotated
Scaffold_64	274455	Protein CHROMATIN REMODELING 4 (AtCHR4) (EC 3.6.4.-) (Protein PICKLE RELATED 1)
Scaffold_64	520023	Protein CHROMATIN REMODELING 4 (AtCHR4) (EC 3.6.4.-) (Protein PICKLE RELATED 1)
Scaffold_64	780395	Unannotated
Scaffold_64	963503	Unannotated
Scaffold_64	1321437	Unannotated
Scaffold_65	24904	Unannotated
Scaffold_65	163548	Unannotated
Scaffold_65	383471	Unannotated
Scaffold_65	578242	Unannotated
Scaffold_65	722196	Unannotated
Scaffold_65	845245	Unannotated
Scaffold_65	853875	Unannotated
Scaffold_65	1034736	Probable serine/threonine-protein kinase At1g54610 (EC 2.7.11.1)
Scaffold_65	1055709	Unannotated
Scaffold_66	243526	Unannotated
Scaffold_66	445985	Unannotated
Scaffold_66	614632	Unannotated
Scaffold_66	1321538	Unannotated
Scaffold_67	91172	C-terminal binding protein AN (CtBP) (Protein ANGUSTIFOLIA) (Protein DETORQUEO)
Scaffold_67	100597	Unannotated
Scaffold_67	219215	Unannotated
Scaffold_67	834051	Unannotated
Scaffold_67	1001338	Unannotated
Scaffold_67	1055811	Unannotated
Scaffold_67	1233518	Unannotated
Scaffold_67	1376529	Unannotated
Scaffold_68	30646	Unannotated
Scaffold_68	30682	Unannotated
Scaffold_68	356603	Unannotated
Scaffold_68	429121	Unannotated
Scaffold_68	611880	Unannotated
Scaffold_68	685713	Unannotated
Scaffold_68	689460	ABC transporter A family member 1 (ABC transporter ABCA.1) (AtABCA1) (ABC one homolog protein 1) (AtAOH1)
Scaffold_68	1209755	Unannotated
Scaffold_69	124865	Adenosylhomocysteinase (AdoHcyase) (EC 3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
Scaffold_69	124906	Unannotated
Scaffold_69	558049	Unannotated
Scaffold_69	693436	Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic nucleotide- and calmodulin-regulated ion channel 1)
Scaffold_69	972087	Unannotated
Scaffold_69	1087915	Unannotated
Scaffold_69	1107641	Protein NETWORKED 1D
Scaffold_70	443173	Unannotated
Scaffold_70	503293	Unannotated
Scaffold_70	513815	Unannotated
Scaffold_70	534792	Unannotated
Scaffold_70	571239	Unannotated
Scaffold_70	653792	Unannotated
Scaffold_70	810516	Unannotated
Scaffold_70	1081399	Unannotated
Scaffold_70	1101163	Unannotated
Scaffold_70	1118570	Unannotated
Scaffold_71	270369	Unannotated
Scaffold_71	437479	Unannotated
Scaffold_71	589472	Unannotated
Scaffold_71	1051694	Leucine-rich repeat receptor protein kinase EMS1 (EC 2.7.11.1) (Protein EXCESS MICROSPOROCYTES 1) (Protein EXTRA SPOROGENOUS CELLS)
Scaffold_71	1116247	Unannotated
Scaffold_71	1126144	Unannotated
Scaffold_71	1290210	Chloride channel protein CLC-b (AtCLC-b) (CBS domain-containing protein CBSCLC7)
Scaffold_71	1378555	Unannotated
Scaffold_72	188227	Unannotated
Scaffold_72	214305	Unannotated
Scaffold_72	274600	Unannotated
Scaffold_72	331665	Unannotated
Scaffold_72	492257	Receptor-like serine/threonine-protein kinase ALE2 (EC 2.7.11.1) (Protein ABNORMAL LEAF SHAPE 2)
Scaffold_72	647307	Unannotated
Scaffold_72	775351	Unannotated
Scaffold_72	875743	Unannotated
Scaffold_72	878108	Unannotated
Scaffold_72	934639	Unannotated
Scaffold_72	1176846	Unannotated
Scaffold_72	1176847	Unannotated
Scaffold_73	732150	Unannotated
Scaffold_73	806535	Thioredoxin M3, chloroplastic (AtTrxm3) (Protein GFP ARRESTED TRAFFICKING 1)
Scaffold_73	854611	Unannotated
Scaffold_73	863483	Unannotated
Scaffold_73	1033534	Unannotated
Scaffold_73	1166466	tRNA-splicing endonuclease subunit Sen2-2 (EC 4.6.1.16) (tRNA-intron endonuclease Sen2-2) (AtSen2)
Scaffold_73	1275515	Unannotated
Scaffold_74	166290	Unannotated
Scaffold_74	453017	Unannotated
Scaffold_74	732450	Unannotated
Scaffold_74	732675	Unannotated
Scaffold_74	783056	Unannotated
Scaffold_74	783253	Unannotated
Scaffold_74	895326	Unannotated
Scaffold_75	45444	Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830 (Protein b561A.tha1)
Scaffold_75	220848	Receptor-like protein kinase (EC 2.7.11.1)
Scaffold_77	125764	Probable protein phosphatase 2C 73 (AtPP2C73) (EC 3.1.3.16) (AtPPC6;7)
Scaffold_78	16366	Unannotated
Scaffold_80	65335	Unannotated
Scaffold_80	65336	Unannotated
Scaffold_80	192327	Unannotated
Scaffold_82	125570	L-aspartate oxidase, chloroplastic (EC 1.4.3.16) (Protein FLAGELLIN-INSENSITIVE 4)
Scaffold_82	238329	Unannotated
Scaffold_82	300664	Unannotated
Scaffold_83	15275	Unannotated
Scaffold_83	140154	DNA-directed RNA polymerase D subunit 2b (AtNRPD2b) (Nuclear RNA polymerase D 2b) (EC 2.7.7.6) (RNA polymerase IV subunit 2b) (POL IV 2b)
Scaffold_84	95972	Unannotated
Scaffold_84	205184	Unannotated
Scaffold_85	392	1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 (AtDHNAT1) (DHNA-CoA thioesterase 1) (EC 3.1.2.-)
Scaffold_85	199813	Unannotated
Scaffold_85	225174	Unannotated
Scaffold_86	4703	Unannotated
Scaffold_86	6504	Unannotated
Scaffold_86	6604	Unannotated
Scaffold_86	37418	Endochitinase (EC 3.2.1.14)
Scaffold_87	146363	Probable carboxylesterase 11 (AtCXE11) (EC 3.1.1.1)
Scaffold_87	146509	Unannotated
Scaffold_87	146510	Unannotated
Scaffold_89	174799	Boron transporter 1
Scaffold_90	56118	Unannotated
Scaffold_90	228959	Unannotated
Scaffold_91	162122	Unannotated
Scaffold_91	203104	Unannotated
Scaffold_91	224790	Unannotated
Scaffold_91	326511	Unannotated
Scaffold_91	348120	Unannotated
Scaffold_92	90454	Unannotated
Scaffold_94	94494	Unannotated
Scaffold_94	324126	Unannotated
Scaffold_94	351308	Unannotated
Scaffold_95	286585	ATP-dependent RNA helicase DEAH13 (EC 3.6.4.13) (Protein FASCIATED STEM 4) (AtFAS4)
Scaffold_96	94000	Unannotated
Scaffold_96	112639	Unannotated
Scaffold_96	260394	Unannotated
Scaffold_97	22032	Unannotated
Scaffold_97	159556	Unannotated
Scaffold_97	159656	Protein CHROMATIN REMODELING 20 (AtCHR20) (EC 3.6.4.-) (ATP-dependent helicase ATRX) (Transcriptional regulator ATRX) (X-linked helicase II)
Scaffold_97	159657	Unannotated
Scaffold_98	181467	Unannotated
Scaffold_99	30042	Unannotated
Scaffold_99	30167	Unannotated
Scaffold_99	30233	Unannotated
Scaffold_99	30337	Unannotated
Scaffold_100	86833	Unannotated
Scaffold_100	150214	Unannotated
Scaffold_100	194666	Unannotated
Scaffold_100	418108	Unannotated
Scaffold_101	167312	Unannotated
Scaffold_102	51417	Unannotated
Scaffold_102	402518	Unannotated
Scaffold_103	21730	Unannotated
Scaffold_103	30000	Unannotated
Scaffold_103	226580	Unannotated
Scaffold_103	226582	Unannotated
Scaffold_104	131567	Unannotated
Scaffold_104	263174	Subtilisin-like protease SBT1.8 (EC 3.4.21.-) (Subtilase subfamily 1 member 8) (AtSBT1.8)
Scaffold_104	312942	Unannotated
Scaffold_105	50996	Unannotated
Scaffold_105	200458	Unannotated
Scaffold_105	346363	Unannotated
Scaffold_106	142716	Unannotated
Scaffold_106	285791	Unannotated
Scaffold_106	285792	Unannotated
Scaffold_106	337986	Zinc finger protein BRUTUS (Protein EMBRYO DEFECTIVE 2454)
Scaffold_106	496521	Unannotated
Scaffold_107	46613	Unannotated
Scaffold_108	7278	Unannotated
Scaffold_108	34582	Unannotated
Scaffold_108	169852	Unannotated
Scaffold_108	239423	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 7.6.2.4) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
Scaffold_108	239682	ABC transporter D family member 1 (ABC transporter ABCD.1) (AtABCD1) (EC 7.6.2.4) (Peroxisomal ABC transporter 1) (AtPXA1) (Protein ACETATE NON-UTILIZING 2) (Protein COMATOSE) (Protein PEROXISOME DEFECTIVE 3) (Ped3p)
Scaffold_108	256830	Unannotated
Scaffold_109	109538	Unannotated
Scaffold_109	222767	Unannotated
Scaffold_110	28285	Unannotated
Scaffold_111	290954	COMPASS-like H3K4 histone methylase component WDR5A (AtWDR5A)
Scaffold_111	348649	Unannotated
Scaffold_112	10190	Unannotated
Scaffold_112	108910	Unannotated
Scaffold_112	108951	Unannotated
Scaffold_112	108997	Unannotated
Scaffold_112	174212	Unannotated
Scaffold_112	277320	Protein SMAX1-LIKE 8 (AtSMXL8) (Protein D53-like 3) (AtD53-like 3) (Protein D53-like SMXL 8)
Scaffold_112	330288	Serine decarboxylase (AtSDC) (EC 4.1.1.-) (Protein EMBRYO DEFECTIVE 1075) (Serine decarboxylase 1) (AtSDC1)
Scaffold_112	406564	Unannotated
Scaffold_113	388731	Unannotated
Scaffold_113	497949	Unannotated
Scaffold_113	501109	Unannotated
Scaffold_114	39922	Unannotated
Scaffold_114	164519	Unannotated
Scaffold_114	381366	Unannotated
Scaffold_115	81574	Unannotated
Scaffold_115	168987	Unannotated
Scaffold_115	218443	Unannotated
Scaffold_115	293608	Unannotated
Scaffold_116	115536	Unannotated
Scaffold_116	153498	Unannotated
Scaffold_116	220060	Unannotated
Scaffold_117	9188	Isocitrate dehydrogenase [NADP] (IDH) (EC 1.1.1.42) (IDP) (NADP(+)-specific ICDH) (Oxalosuccinate decarboxylase)
Scaffold_117	98045	Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B (Oligosaccharyl transferase subunit STT3B) (STT3-B) (EC 2.4.99.18) (Protein STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B)
Scaffold_117	98046	Unannotated
Scaffold_117	242849	Unannotated
Scaffold_118	105417	Unannotated
Scaffold_118	107626	Unannotated
Scaffold_118	222374	Unannotated
Scaffold_118	358676	Unannotated
Scaffold_118	361321	Polyol transporter 5 (Protein POLYOL TRANSPORTER 5) (AtPLT5) (Sugar-proton symporter PLT5)
Scaffold_118	362543	Unannotated
Scaffold_118	427771	Unannotated
Scaffold_119	1713	Unannotated
Scaffold_119	277754	Unannotated
Scaffold_119	372177	Unannotated
Scaffold_119	375751	Unannotated
Scaffold_120	326672	Unannotated
Scaffold_121	32267	Unannotated
Scaffold_121	38461	Unannotated
Scaffold_121	114837	Unannotated
Scaffold_121	114937	Unannotated
Scaffold_121	396451	Unannotated
Scaffold_122	149825	Unannotated
Scaffold_122	149826	3-isopropylmalate dehydratase large subunit, chloroplastic (EC 4.2.1.33) (AtLEUC) (Isopropylmalate isomerase large subunit 1) (AtIIL1)
Scaffold_122	152887	Unannotated
Scaffold_122	174070	Unannotated
Scaffold_122	283690	Unannotated
Scaffold_122	322415	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (EC 2.7.11.1) (Protein BARELY ANY MERISTEM 3)
Scaffold_122	361774	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (EC 2.7.11.1) (Protein BARELY ANY MERISTEM 3)
Scaffold_122	402697	Unannotated
Scaffold_122	418202	Unannotated
Scaffold_123	311366	Unannotated
Scaffold_123	408286	Calcium-binding protein CP1 (NaCl-inducible Ca2+-binding protein) (AtCP1)
Scaffold_123	465894	Unannotated
Scaffold_123	478993	Phosphatidylinositol 4-kinase gamma 4 (AtPI4Kgamma4) (PI-4Kgamma4) (PI4K gamma 4) (EC 2.7.1.67) (Ubiquitin-like domain kinase gamma 4) (UbDK gamma 4)
Scaffold_124	209643	GDP-L-galactose phosphorylase 1 (EC 2.7.7.69) (Protein VITAMIN C DEFECTIVE 2)
Scaffold_125	77228	Unannotated
Scaffold_125	80362	Linoleate 13S-lipoxygenase 2-1, chloroplastic (EC 1.13.11.12) (Lipoxygenase 2-1)
Scaffold_126	88363	PP2A regulatory subunit TAP46
Scaffold_126	166086	Unannotated
Scaffold_126	233751	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 (EC 2.7.11.1) (Receptor-like kinase 4) (S-domain-2 (SD2) receptor kinase 2) (SD2-2)
Scaffold_127	278548	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1 (EC 2.1.1.14) (Cobalamin-independent methionine synthase 1) (AtMS1) (Vitamin-B12-independent methionine synthase 1)
Scaffold_127	416194	Unannotated
Scaffold_129	203393	Unannotated
Scaffold_129	350055	Unannotated
Scaffold_129	526953	Unannotated
Scaffold_129	569810	Unannotated
Scaffold_130	108910	Unannotated
Scaffold_130	137566	Unannotated
Scaffold_132	442385	Unannotated
Scaffold_133	44002	Linoleate 13S-lipoxygenase 3-1, chloroplastic (EC 1.13.11.12)
Scaffold_134	116330	Unannotated
Scaffold_134	142232	Unannotated
Scaffold_134	355509	Unannotated
Scaffold_135	110692	Unannotated
Scaffold_135	144770	Unannotated
Scaffold_135	405466	Unannotated
Scaffold_136	81864	Unannotated
Scaffold_136	83293	Unannotated
Scaffold_136	84246	Aconitate hydratase, cytoplasmic (Aconitase) (EC 4.2.1.3) (Citrate hydro-lyase)
Scaffold_136	87734	Unannotated
Scaffold_136	87839	Unannotated
Scaffold_136	88507	Unannotated
Scaffold_139	5611	Unannotated
Scaffold_139	95639	Unannotated
Scaffold_140	40518	Unannotated
Scaffold_140	75463	Unannotated
Scaffold_140	217477	Unannotated
Scaffold_140	217481	Unannotated
Scaffold_140	455868	Unannotated
Scaffold_140	455969	Unannotated
Scaffold_140	517833	Unannotated
Scaffold_141	41884	Unannotated
Scaffold_141	291251	Unannotated
Scaffold_141	298673	Unannotated
Scaffold_141	303114	Unannotated
Scaffold_141	303125	Unannotated
Scaffold_141	311102	Unannotated
Scaffold_141	418059	Unannotated
Scaffold_142	274059	F-box/LRR-repeat protein At4g29420
Scaffold_142	468212	L-type lectin-domain containing receptor kinase IV.4 (LecRK-IV.4) (EC 2.7.11.1)
Scaffold_142	593450	Unannotated
Scaffold_143	76925	Unannotated
Scaffold_143	166338	Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase)
Scaffold_143	318227	Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase)
Scaffold_144	262704	Unannotated
Scaffold_145	404439	Unannotated
Scaffold_145	438980	Unannotated
Scaffold_146	177967	Probable ubiquitin-like-specific protease 2B (EC 3.4.22.-)
Scaffold_146	311296	Probable inactive purple acid phosphatase 2
Scaffold_146	312647	Unannotated
Scaffold_146	326013	Unannotated
Scaffold_147	26248	LOB domain-containing protein 38 (ASYMMETRIC LEAVES 2-like protein 40) (AS2-like protein 40)
Scaffold_147	230240	Unannotated
Scaffold_147	485175	Probable mediator of RNA polymerase II transcription subunit 37e (Heat shock 70 kDa protein 1) (Heat shock cognate 70 kDa protein 1) (Heat shock cognate protein 70-1) (AtHsc70-1) (Heat shock protein 70-1) (AtHsp70-1) (Protein EARLY-RESPONSIVE TO DEHYDRATI
Scaffold_147	558212	Unannotated
Scaffold_147	580114	Unannotated
Scaffold_148	2718	Unannotated
Scaffold_148	2719	Unannotated
Scaffold_148	93024	Unannotated
Scaffold_148	109820	Unannotated
Scaffold_148	109867	Unannotated
Scaffold_148	128314	Unannotated
Scaffold_148	133483	Unannotated
Scaffold_148	330254	Unannotated
Scaffold_149	16698	Probable protein S-acyltransferase 22 (EC 2.3.1.225) (Probable palmitoyltransferase At1g69420) (Zinc finger DHHC domain-containing protein At1g69420)
Scaffold_149	19349	Probable protein S-acyltransferase 22 (EC 2.3.1.225) (Probable palmitoyltransferase At1g69420) (Zinc finger DHHC domain-containing protein At1g69420)
Scaffold_149	30956	Unannotated
Scaffold_149	129342	Unannotated
Scaffold_149	287304	Unannotated
Scaffold_149	287463	Unannotated
Scaffold_149	288566	DEAD-box ATP-dependent RNA helicase 3, chloroplastic (EC 3.6.4.13) (Protein EMBRYO DEFECTIVE 1138)
Scaffold_149	288567	Unannotated
Scaffold_149	413638	Unannotated
Scaffold_149	432990	Unannotated
Scaffold_149	432996	Unannotated
Scaffold_150	68272	Unannotated
Scaffold_150	173403	Unannotated
Scaffold_150	262283	Unannotated
Scaffold_150	276840	Unannotated
Scaffold_150	510950	Unannotated
Scaffold_151	249281	Serine/threonine-protein phosphatase 5 (EC 3.1.3.16)
Scaffold_151	267409	Unannotated
Scaffold_152	134888	Unannotated
Scaffold_152	155812	Unannotated
Scaffold_152	333179	Unannotated
Scaffold_152	418883	Unannotated
Scaffold_152	501725	Unannotated
Scaffold_153	18499	Unannotated
Scaffold_153	546706	Unannotated
Scaffold_154	38057	Unannotated
Scaffold_154	111343	Unannotated
Scaffold_154	119720	Unannotated
Scaffold_154	141172	Unannotated
Scaffold_154	141184	DNA damage-repair/toleration protein DRT100
Scaffold_154	431780	Unannotated
Scaffold_155	129117	Unannotated
Scaffold_155	233105	Unannotated
Scaffold_155	307998	Unannotated
Scaffold_155	465348	Unannotated
Scaffold_156	55198	Unannotated
Scaffold_156	177662	Unannotated
Scaffold_156	234311	Unannotated
Scaffold_156	272166	Unannotated
Scaffold_156	435030	Unannotated
Scaffold_157	59281	Unannotated
Scaffold_157	166352	Unannotated
Scaffold_157	166412	Unannotated
Scaffold_157	446880	Transcription factor MYC2 (AtMYC2) (Basic helix-loop-helix protein 6) (AtbHLH6) (bHLH 6) (Protein JASMONATE INSENSITIVE 1) (R-homologous Arabidopsis protein 1) (RAP-1) (Transcription factor EN 38) (Z-box binding factor 1 protein) (bHLH transcription facto
Scaffold_157	457216	Unannotated
Scaffold_157	457217	Unannotated
Scaffold_157	527047	CLP protease regulatory subunit CLPX1, mitochondrial
Scaffold_157	581884	Unannotated
Scaffold_158	64340	Unannotated
Scaffold_158	211525	Unannotated
Scaffold_159	141789	Unannotated
Scaffold_159	141790	Unannotated
Scaffold_159	206633	Unannotated
Scaffold_159	220126	Unannotated
Scaffold_159	220190	Unannotated
Scaffold_159	220367	Unannotated
Scaffold_159	220522	Unannotated
Scaffold_159	220603	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
Scaffold_159	220830	Unannotated
Scaffold_159	220867	Unannotated
Scaffold_159	220972	Unannotated
Scaffold_159	255332	Unannotated
Scaffold_160	249303	Unannotated
Scaffold_160	443251	Unannotated
Scaffold_160	443351	Unannotated
Scaffold_162	133140	Unannotated
Scaffold_163	188648	Unannotated
Scaffold_163	477686	Unannotated
Scaffold_164	90745	Unannotated
Scaffold_164	202752	Putative glycerol-3-phosphate transporter 1 (G-3-P transporter 1) (Glycerol-3-phosphate permease 1) (AtG3Pp1) (G-3-P permease 1) (Protein PHOSPHATE STARVATION-INDUCED GENE 3) (AtPS3)
Scaffold_165	51870	Unannotated
Scaffold_165	437859	CDK5RAP1-like protein
Scaffold_165	492725	CDK5RAP1-like protein
Scaffold_165	492749	Unannotated
Scaffold_166	59360	Unannotated
Scaffold_167	367756	Unannotated
Scaffold_167	367759	E3 ubiquitin-protein ligase UPL3 (Ubiquitin-protein ligase 3) (EC 2.3.2.26) (HECT ubiquitin-protein ligase 3) (HECT-type E3 ubiquitin transferase UPL3) (Protein KAKTUS)
Scaffold_167	390033	Unannotated
Scaffold_167	570806	Unannotated
Scaffold_167	622767	Unannotated
Scaffold_167	622773	Unannotated
Scaffold_168	69565	Unannotated
Scaffold_168	275689	Unannotated
Scaffold_168	275707	Unannotated
Scaffold_168	276385	Unannotated
Scaffold_168	369110	Unannotated
Scaffold_168	373059	Unannotated
Scaffold_169	171075	Unannotated
Scaffold_169	451194	Unannotated
Scaffold_169	525893	Unannotated
Scaffold_169	593404	Nucleolar GTP-binding protein 1
Scaffold_170	198984	Nucleolar GTP-binding protein 1
Scaffold_170	285104	Nucleolar GTP-binding protein 1
Scaffold_171	58978	Unannotated
Scaffold_171	226609	Unannotated
Scaffold_171	380575	Unannotated
Scaffold_171	404528	Unannotated
Scaffold_171	475930	Unannotated
Scaffold_171	518408	Unannotated
Scaffold_171	519732	Unannotated
Scaffold_171	519736	Unannotated
Scaffold_171	540038	Unannotated
Scaffold_171	553106	Unannotated
Scaffold_171	661075	Carbon catabolite repressor protein 4 homolog 2 (CCR4 homolog 2) (EC 3.1.13.4)
Scaffold_172	284178	Unannotated
Scaffold_172	361350	Unannotated
Scaffold_172	367887	F-box protein At5g39450
Scaffold_172	537198	Farnesylcysteine lyase (EC 1.8.3.6)
Scaffold_172	542018	Farnesylcysteine lyase (EC 1.8.3.6)
Scaffold_172	544574	Unannotated
Scaffold_172	559068	Unannotated
Scaffold_172	599576	Unannotated
Scaffold_172	633782	Unannotated
Scaffold_172	688042	Unannotated
Scaffold_173	17560	DNA topoisomerase 6 subunit A (AtTOP6A) (EC 5.6.2.2) (Meiotic recombination protein SPO11-3) (AtSPO11-3) (Protein BRASSINOSTEROID INSENSITIVE 5) (Protein ROOT HAIRLESS 2)
Scaffold_173	80335	Unannotated
Scaffold_173	271235	Unannotated
Scaffold_173	320435	Unannotated
Scaffold_173	428054	Unannotated
Scaffold_173	429337	Unannotated
Scaffold_173	429338	Unannotated
Scaffold_174	19802	Unannotated
Scaffold_174	65943	Chaperone protein ClpB3, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 3) (Casein lytic proteinase B3) (Protein ALBINO OR PALE GREEN 6)
Scaffold_174	188800	Unannotated
Scaffold_174	341273	Unannotated
Scaffold_174	398691	Unannotated
Scaffold_174	501388	Unannotated
Scaffold_176	80593	Unannotated
Scaffold_176	81029	Unannotated
Scaffold_176	179274	Unannotated
Scaffold_176	341745	Unannotated
Scaffold_177	225841	Unannotated
Scaffold_177	315682	Myosin-6 (AtMYA2)
Scaffold_177	315706	Unannotated
Scaffold_177	331193	Pyruvate decarboxylase 2 (PDC) (EC 4.1.1.1) (Fragment)
Scaffold_177	412955	Unannotated
Scaffold_177	415216	Unannotated
Scaffold_177	650545	Unannotated
Scaffold_177	679629	Unannotated
Scaffold_177	679631	Unannotated
Scaffold_178	208510	Unannotated
Scaffold_178	302123	Unannotated
Scaffold_178	564723	Unannotated
Scaffold_178	741520	Unannotated
Scaffold_179	210711	Unannotated
Scaffold_180	155982	Unannotated
Scaffold_180	155991	Unannotated
Scaffold_180	156040	Unannotated
Scaffold_180	156052	Unannotated
Scaffold_180	156373	Unannotated
Scaffold_180	294223	Unannotated
Scaffold_180	498844	Unannotated
Scaffold_181	471955	Unannotated
Scaffold_181	482871	Unannotated
Scaffold_181	483055	Unannotated
Scaffold_181	539012	Unannotated
Scaffold_181	539020	Unannotated
Scaffold_181	589433	Unannotated
Scaffold_181	619466	Unannotated
Scaffold_181	643962	Unannotated
Scaffold_181	676797	Probable UDP-arabinopyranose mutase 4 (EC 5.4.99.30) (Reversibly glycosylated polypeptide 4) (AtRGP4) (UDP-L-arabinose mutase 4)
Scaffold_181	678121	Unannotated
Scaffold_181	692185	Unannotated
Scaffold_181	853375	Unannotated
Scaffold_182	94556	Unannotated
Scaffold_188	16716	Unannotated
Scaffold_192	35876	Unannotated
Scaffold_192	59362	Unannotated
Scaffold_197	39472	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_198	76694	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_205	52460	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_205	86679	DNA-directed RNA polymerase II subunit 2 (DNA-directed RNA polymerase II 135 kDa polypeptide) (DNA-directed RNA polymerase II subunit RPB2) (RNA polymerase II subunit 2) (RNA polymerase II subunit B2) (EC 2.7.7.6) (Protein EMBRYO DEFECTIVE 1989)
Scaffold_206	31347	Unannotated
Scaffold_206	75685	Unannotated
Scaffold_208	29785	Unannotated
Scaffold_210	39359	Unannotated
Scaffold_210	53708	Unannotated
Scaffold_211	35282	Unannotated
Scaffold_211	35283	Unannotated
Scaffold_214	1933	Unannotated
Scaffold_224	69023	Unannotated
Scaffold_231	73257	Unannotated
Scaffold_234	1304	Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13)
Scaffold_237	17498	Rab escort protein 1 (AthREP)
Scaffold_237	70960	Unannotated
Scaffold_239	1274	Unannotated
Scaffold_239	75654	Unannotated
Scaffold_240	26101	Unannotated
Scaffold_243	15764	Unannotated
Scaffold_245	61120	Unannotated
Scaffold_246	33232	Extra-large guanine nucleotide-binding protein 1 (Extra-large GTP-binding protein 1) (Extra-large G-protein 1)
Scaffold_251	83845	Unannotated
Scaffold_252	9978	Lysine-specific demethylase JMJ30 (AtJMJ30) (EC 1.14.11.-) (JmjC domain-containing protein 30) (Jumonji domain-containing protein 5) (AtJMJD5)
Scaffold_254	33820	Unannotated
Scaffold_256	38047	Unannotated
Scaffold_257	52644	ABC transporter I family member 20 (ABC transporter ABCI.20) (AtABCI20) (GCN-related protein 3) (Non-intrinsic ABC protein 9)
Scaffold_257	52645	Protein LHCP TRANSLOCATION DEFECT
Scaffold_269	6361	Dicer-like protein 4 (EC 3.1.26.-)
Scaffold_277	60791	Zinc finger protein CONSTANS-LIKE 10
Scaffold_277	82962	Unannotated
Scaffold_280	14538	Exonuclease V, chloroplastic (Exo V) (EC 3.1.-.-)
Scaffold_288	82933	Unannotated
Scaffold_289	48699	Unannotated
Scaffold_292	50479	Unannotated
Scaffold_296	68875	Unannotated
Scaffold_297	28034	Unannotated
Scaffold_298	71131	Unannotated
Scaffold_299	3210	UDP-glucose 4-epimerase GEPI42 (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
Scaffold_301	44890	Unannotated
Scaffold_304	9514	Unannotated
Scaffold_325	27412	Scarecrow-like protein 3 (AtSCL3) (GRAS family protein 5) (AtGRAS-5)
Scaffold_325	70145	Unannotated
Scaffold_327	28966	Unannotated
Scaffold_327	49676	Cation-chloride cotransporter 1 (AtCCC1) (Protein HAPLESS 5)
Scaffold_339	74236	50S ribosomal protein L35, chloroplastic
Scaffold_343	65282	Unannotated
Scaffold_343	80158	Unannotated
Scaffold_349	6881	Unannotated
Scaffold_364	64522	Unannotated
Scaffold_370	4865	NAC domain-containing protein 22 (ONAC022)
Scaffold_374	49303	Unannotated
Scaffold_378	52225	Unannotated
Scaffold_390	13986	Unannotated
Scaffold_392	34895	3-dehydroquinate synthase, chloroplastic (EC 4.2.3.4)
Scaffold_392	55883	Unannotated
Scaffold_417	14408	Protein TOC75-3, chloroplastic (75 kDa translocon at the outer-envelope-membrane of chloroplasts 3) (AtTOC75-III)
Scaffold_420	9337	Unannotated
Scaffold_421	10214	Zinc finger protein ZAT4
Scaffold_431	4246	Unannotated
Scaffold_447	13564	Calmodulin-1 (CaM-1)
Scaffold_448	62530	Unannotated
Scaffold_458	30182	Pheophytinase, chloroplastic (EC 3.1.1.-) (Pheophytin pheophorbide hydrolase) (Protein CO-REGULATED WITH NYE1)
Scaffold_475	8716	Eukaryotic peptide chain release factor subunit 1-3 (Eukaryotic release factor 1-3) (eRF1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3)
Scaffold_476	52909	Benzyl alcohol O-benzoyltransferase (EC 2.3.1.196) (Benzoyl coenzyme A:benzyl alcohol benzoyl transferase)
Scaffold_481	2716	Mitogen-activated protein kinase kinase kinase ANP1 (EC 2.7.11.25) (Arabidopsis NPK1-related kinase 1)
Scaffold_481	2718	Unannotated
Scaffold_481	2719	Unannotated
Scaffold_481	2731	Unannotated
Scaffold_481	2775	Unannotated
Scaffold_494	1621	Eukaryotic translation initiation factor 5 (eIF-5)
Scaffold_495	51518	Unannotated
Scaffold_496	26478	Unannotated
Scaffold_497	4331	Unannotated
Scaffold_498	25986	Unannotated
Scaffold_498	26004	Unannotated
Scaffold_504	59847	Unannotated
Scaffold_509	21094	Unannotated
Scaffold_523	28466	Obg-like ATPase 1 (Ribosome-binding ATPase YchF) (OsYchF1)
Scaffold_523	28566	Unannotated
Scaffold_524	5121	Unannotated
Scaffold_526	6425	Unannotated
Scaffold_535	47140	Unannotated
Scaffold_537	6296	Unannotated
Scaffold_550	4101	Unannotated
Scaffold_551	46776	Unannotated
Scaffold_554	1778	Calcium-transporting ATPase 4, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-ATPase isoform 4)
Scaffold_557	52518	Calcium-transporting ATPase 4, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-ATPase isoform 4)
Scaffold_562	49983	Unannotated
Scaffold_566	4513	Unannotated
Scaffold_570	49678	Unannotated
Scaffold_581	40467	Unannotated
Scaffold_597	242	Unannotated
Scaffold_597	960	Unannotated
Scaffold_618	68447	Pentatricopeptide repeat-containing protein At5g04810, chloroplastic (Maize PPR4 homolog) (AtPPR4)
Scaffold_620	27757	EIN3-binding F-box protein 1 (F-box/LRR-repeat protein 6)
Scaffold_621	27058	Unannotated
Scaffold_623	31353	Unannotated
Scaffold_629	27089	Probable galactinol--sucrose galactosyltransferase 6 (EC 2.4.1.82) (Protein DARK INDUCIBLE 10) (Raffinose synthase 6)
Scaffold_631	13124	Unannotated
Scaffold_640	42385	Calcium-transporting ATPase 4, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-ATPase isoform 4)
Scaffold_647	66444	Calcium-transporting ATPase 4, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-ATPase isoform 4)
Scaffold_647	66517	Unannotated
Scaffold_647	66558	Unannotated
Scaffold_647	66560	Unannotated
Scaffold_648	38022	Unannotated
Scaffold_663	41126	Hydroquinone glucosyltransferase (EC 2.4.1.218) (Arbutin synthase)
Scaffold_669	43855	Unannotated
Scaffold_670	24244	Unannotated
Scaffold_671	63499	Unannotated
Scaffold_673	62559	Unannotated
Scaffold_677	7963	Unannotated
Scaffold_679	44868	Unannotated
Scaffold_685	30636	Unannotated
Scaffold_690	25435	Unannotated
Scaffold_702	18313	Unannotated
Scaffold_708	29197	Unannotated
Scaffold_721	26748	Unannotated
Scaffold_724	19469	Unannotated
Scaffold_724	36394	Unannotated
Scaffold_728	46727	Unannotated
Scaffold_732	47449	Unannotated
Scaffold_736	57743	Ferredoxin--NADP reductase, leaf isozyme, chloroplastic (FNR) (EC 1.18.1.2)
Scaffold_739	18184	Unannotated
Scaffold_741	10346	Unannotated
Scaffold_744	11603	Unannotated
Scaffold_747	7987	Unannotated
Scaffold_747	8060	Unannotated
Scaffold_747	8117	CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 3) (Calmodulin-binding protein kinase 3) (AtCBK3) (CaM-binding protein kinase 3)
Scaffold_751	25121	Unannotated
Scaffold_751	25143	Unannotated
Scaffold_762	29822	tRNA(adenine(34)) deaminase, chloroplastic (TADA) (EC 3.5.4.33) (tRNA adenosine deaminase arginine) (tRNA arginine adenosine deaminase)
Scaffold_764	56393	Unannotated
Scaffold_767	7118	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 1) (AtTPS1)
Scaffold_767	21569	Unannotated
Scaffold_768	27871	Unannotated
Scaffold_793	64371	Unannotated
Scaffold_798	63375	Probable serine/threonine-protein kinase PBL19 (EC 2.7.11.1) (PBS1-like protein 19)
Scaffold_805	52390	Probable serine/threonine-protein kinase PBL19 (EC 2.7.11.1) (PBS1-like protein 19)
Scaffold_818	29317	Unannotated
Scaffold_837	55674	Unannotated
Scaffold_840	42040	Unannotated
Scaffold_840	42610	Unannotated
Scaffold_849	4788	Unannotated
Scaffold_859	9759	Unannotated
Scaffold_866	58420	Unannotated
Scaffold_866	58760	Unannotated
Scaffold_873	41369	Unannotated
Scaffold_875	24709	Unannotated
Scaffold_884	4237	Unannotated
Scaffold_889	43752	Unannotated
Scaffold_893	61772	Unannotated
Scaffold_901	54513	Unannotated
Scaffold_923	9892	Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 11) (AtTPS11)
Scaffold_934	56478	Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 11) (AtTPS11)
Scaffold_937	8298	Unannotated
Scaffold_964	7345	Unannotated
Scaffold_978	53597	Unannotated
Scaffold_979	52213	Unannotated
Scaffold_984	1174	Unannotated
Scaffold_986	48549	Unannotated
Scaffold_990	6226	Unannotated
Scaffold_990	6235	Unannotated
Scaffold_990	6281	Unannotated
Scaffold_990	6316	Unannotated
Scaffold_990	6451	Unannotated
Scaffold_993	39830	Unannotated
Scaffold_1011	55082	Unannotated
Scaffold_1011	55095	Unannotated
Scaffold_1012	17032	Unannotated
Scaffold_1013	48449	Unannotated
Scaffold_1013	55734	Unannotated
Scaffold_1014	35686	Unannotated
Scaffold_1018	54652	Unannotated
Scaffold_1023	49132	Unannotated
Scaffold_1028	48446	Unannotated
Scaffold_1033	9552	Unannotated
Scaffold_1033	9579	Unannotated
Scaffold_1033	9588	Unannotated
Scaffold_1038	32430	Unannotated
Scaffold_1040	38420	Unannotated
Scaffold_1041	6372	Unannotated
Scaffold_1065	263	Unannotated
Scaffold_1076	48638	Unannotated
Scaffold_1077	52923	Mannose-1-phosphate guanylyltransferase 1 (EC 2.7.7.13) (GDP-mannose pyrophosphorylase 1) (Protein CYTOKINESIS DEFECTIVE 1) (Protein EMBRYO DEFECTIVE 101) (Protein HYPERSENSITIVE TO AMMONIUM ION 1) (Protein SENSITIVE TO OZONE 1) (Protein VITAMIN C DEFECTI
Scaffold_1086	10385	Mannose-1-phosphate guanylyltransferase 1 (EC 2.7.7.13) (GDP-mannose pyrophosphorylase 1) (Protein CYTOKINESIS DEFECTIVE 1) (Protein EMBRYO DEFECTIVE 101) (Protein HYPERSENSITIVE TO AMMONIUM ION 1) (Protein SENSITIVE TO OZONE 1) (Protein VITAMIN C DEFECTI
Scaffold_1096	51073	Mannose-1-phosphate guanylyltransferase 1 (EC 2.7.7.13) (GDP-mannose pyrophosphorylase 1) (Protein CYTOKINESIS DEFECTIVE 1) (Protein EMBRYO DEFECTIVE 101) (Protein HYPERSENSITIVE TO AMMONIUM ION 1) (Protein SENSITIVE TO OZONE 1) (Protein VITAMIN C DEFECTI
Scaffold_1118	18944	Unannotated
Scaffold_1146	24120	Unannotated
Scaffold_1152	33513	Unannotated
Scaffold_1156	18358	Unannotated
Scaffold_1156	30987	Unannotated
Scaffold_1159	19224	Urea-proton symporter DUR3 (AtDUR3) (High-affinity urea active transporter DUR3)
Scaffold_1162	34333	Unannotated
Scaffold_1172	1530	Unannotated
Scaffold_1172	37082	Unannotated
Scaffold_1173	1426	Unannotated
Scaffold_1198	8585	Unannotated
Scaffold_1210	9082	Unannotated
Scaffold_1216	24430	Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic (EC 1.2.4.1)
Scaffold_1250	751	Unannotated
Scaffold_1253	151	Unannotated
Scaffold_1254	18135	Unannotated
Scaffold_1264	9270	Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 10) (AtTPS10)
Scaffold_1268	34630	Unannotated
Scaffold_1286	47484	Unannotated
Scaffold_1289	17436	Unannotated
Scaffold_1294	51336	Unannotated
Scaffold_1296	29914	Unannotated
Scaffold_1300	8698	Unannotated
Scaffold_1306	48547	Unannotated
Scaffold_1308	44672	Unannotated
Scaffold_1325	48745	Unannotated
Scaffold_1328	28676	Unannotated
Scaffold_1347	786	Unannotated
Scaffold_1361	31839	UV-stimulated scaffold protein A homolog
Scaffold_1387	1429	Unannotated
Scaffold_1387	1445	Unannotated
Scaffold_1387	7694	Unannotated
Scaffold_1391	14691	Unannotated
Scaffold_1407	7949	Unannotated
Scaffold_1407	8396	Unannotated
Scaffold_1421	14392	Unannotated
Scaffold_1433	27955	Unannotated
Scaffold_1433	28446	Unannotated
Scaffold_1439	48864	Unannotated
Scaffold_1454	14392	Unannotated
Scaffold_1476	13871	Unannotated
Scaffold_1498	48690	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110)
Scaffold_1503	45741	Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110)
Scaffold_1505	21150	Nucleolin 2 (Protein NUCLEOLIN LIKE 2) (AtNUC-L2) (Protein PARALLEL LIKE 1) (AtPARLL1)
Scaffold_1508	35190	Unannotated
Scaffold_1615	44586	Unannotated
Scaffold_1644	15654	Unannotated
Scaffold_1658	15193	Unannotated
Scaffold_1721	4777	Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (FGAM synthase) (FGAMS) (EC 6.3.5.3) (Formylglycinamide ribonucleotide amidotransferase) (FGAR amidotransferase) (FGAR-AT) (Formylglycinamide ribotide amidotransferase)
Scaffold_1735	32334	Unannotated
Scaffold_1777	39635	Unannotated
Scaffold_1790	25523	Unannotated
Scaffold_1802	41708	Unannotated
Scaffold_1827	12915	Unannotated
Scaffold_1879	38007	Unannotated
Scaffold_1901	14194	Unannotated
Scaffold_1934	18016	Unannotated
Scaffold_1943	5950	Unannotated
Scaffold_1943	5968	Unannotated
Scaffold_1943	6143	Unannotated
Scaffold_1951	25848	Unannotated
Scaffold_1951	29896	Unannotated
Scaffold_1989	23567	ATPase 10, plasma membrane-type (EC 7.1.2.1) (Proton pump 10)
Scaffold_2397	98699	Unannotated
Scaffold_2398	6310	Unannotated
Scaffold_2398	77487	Unannotated
Scaffold_2400	18357	Unannotated
Scaffold_2400	75300	Unannotated
Scaffold_2401	129970	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic
Scaffold_2404	131167	Unannotated
Scaffold_2404	156714	Patatin-like protein 6 (AtPLP6) (EC 3.1.1.-) (Patatin-related phospholipase A IIIalpha) (pPLAIIIa) (Phospholipase A IIB) (AtPLAIIB)
Scaffold_2405	74005	Unannotated
Scaffold_2405	86897	Unannotated
Scaffold_2407	3160	Unannotated
Scaffold_2407	6890	Unannotated
Scaffold_2408	35524	ARM REPEAT PROTEIN INTERACTING WITH ABF2 (ARIA)
Scaffold_2408	98009	Unannotated
Scaffold_2408	156916	Unannotated
Scaffold_2408	157575	Unannotated
Scaffold_2408	158661	50S ribosomal protein L29, chloroplastic (CL29)
Scaffold_2408	158730	Unannotated
Scaffold_2409	31899	Protein PAM68, chloroplastic (PHOTOSYNTHESIS AFFECTED MUTANT 68)
Scaffold_2412	2599	Unannotated
Scaffold_2417	139180	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_2417	139206	2-hydroxyisoflavanone synthase (2HI synthase) (EC 1.14.14.87) (CYP Ge-8) (Cytochrome P450 93C2) (Isoflavonoid synthase)
Scaffold_2417	139241	Unannotated
Scaffold_2417	139278	Unannotated
Scaffold_2417	139294	Unannotated
Scaffold_2419	144145	Unannotated
Scaffold_2422	19823	Unannotated
Scaffold_2422	110992	Unannotated
Scaffold_2422	142528	Unannotated
Scaffold_2423	108762	Unannotated
Scaffold_2429	28385	Unannotated
Scaffold_2429	140946	Unannotated
Scaffold_2429	140950	Unannotated
Scaffold_2430	51929	Protein FAR-RED ELONGATED HYPOCOTYL 3
Scaffold_2431	32381	Unannotated
Scaffold_2431	71528	Unannotated
Scaffold_2433	1794	Unannotated
Scaffold_2433	30520	Unannotated
Scaffold_2433	129804	Unannotated
Scaffold_2437	48859	Type IV inositol polyphosphate 5-phosphatase 3 (At5PTase3) (EC 3.1.3.36) (EC 3.1.3.86)
Scaffold_2438	2669	Type IV inositol polyphosphate 5-phosphatase 3 (At5PTase3) (EC 3.1.3.36) (EC 3.1.3.86)
Scaffold_2438	50064	Unannotated
Scaffold_2438	126205	Unannotated
Scaffold_2441	90354	Unannotated
Scaffold_2441	105030	Unannotated
Scaffold_2443	10727	Unannotated
Scaffold_2444	13756	Unannotated
Scaffold_2445	25928	Unannotated
Scaffold_2445	27389	Unannotated
Scaffold_2446	41387	Unannotated
Scaffold_2447	48614	Unannotated
Scaffold_2448	112411	Uncharacterized protein At5g41620
Scaffold_2449	124337	2-hydroxyacyl-CoA lyase (EC 4.1.-.-) (2-hydroxyphytanoyl-CoA lyase) (2-HPCL) (Oxalyl-CoA decarboxylase)
Scaffold_2451	74259	Unannotated
Scaffold_2451	116963	Unannotated
Scaffold_2452	30040	Unannotated
Scaffold_2453	24858	Unannotated
Scaffold_2453	25181	Phospholipase A(1) LCAT3 (EC 3.1.1.32) (Lecithin-cholesterol acyltransferase-like 3)
Scaffold_2455	55997	Unannotated
Scaffold_2455	55998	Unannotated
Scaffold_2455	90557	Aluminum-activated malate transporter 12 (AtALMT12) (Quick anion channel 1)
Scaffold_2467	69991	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog (EC 3.1.3.16) (RNA polymerase II-associated protein 2 homolog)
Scaffold_2468	127408	Unannotated
Scaffold_2478	76062	Unannotated
Scaffold_2479	100900	Unannotated
Scaffold_2481	35919	Unannotated
Scaffold_2483	24985	Unannotated
Scaffold_2488	72373	Unannotated
Scaffold_2489	14457	Unannotated
Scaffold_2490	1005	Unannotated
Scaffold_2490	1057	Protein PIR (PIR of plants) (Protein KLUNKER) (AtSRA1) (Protein PIROGI)
Scaffold_2490	1097	Unannotated
Scaffold_2491	22327	Unannotated
Scaffold_2491	22335	Unannotated
Scaffold_2491	22359	Unannotated
Scaffold_2491	22428	Unannotated
Scaffold_2494	8323	CBL-interacting protein kinase 2 (EC 2.7.11.1) (OsCIPK02)
Scaffold_2495	67081	Unannotated
Scaffold_2495	67409	Unannotated
Scaffold_2498	49868	Unannotated
Scaffold_2498	106032	Unannotated
Scaffold_2500	11624	Unannotated
Scaffold_2501	71852	Unannotated
Scaffold_2501	78028	Unannotated
Scaffold_2502	85041	Unannotated
Scaffold_2505	5251	Unannotated
Scaffold_2505	47960	Unannotated
Scaffold_2506	33450	Unannotated
Scaffold_2506	65073	Transcription termination factor MTERF15, mitochondrial (Mitochondrial transcription termination factor 15)
Scaffold_2507	13884	Unannotated
Scaffold_2507	107404	Unannotated
Scaffold_2519	104764	Protein disulfide isomerase-like 2-2 (OsPDIL2-2) (EC 5.3.4.1) (Protein disulfide isomerase-like 4-2) (OsPDIL4-2)
Scaffold_2521	90229	Unannotated
Scaffold_2523	6707	SART-1 family protein DOT2 (Protein DEFECTIVELY ORGANIZED TRIBUTARIES 2) (Protein MERISTEM-DEFECTIVE)
Scaffold_2524	10893	CBS domain-containing protein CBSX5
Scaffold_2525	89271	Adenylosuccinate synthetase 2, chloroplastic (AMPSase 2) (AdSS 2) (EC 6.3.4.4) (IMP--aspartate ligase 2)
Scaffold_2525	89279	Probable galacturonosyltransferase-like 3 (EC 2.4.1.-)
Scaffold_2525	89318	Unannotated
Scaffold_2528	19286	Unannotated
Scaffold_2535	66325	Unannotated
Scaffold_2536	104417	Unannotated
Scaffold_2538	36849	Unannotated
Scaffold_2538	36850	Unannotated
Scaffold_2538	65680	Unannotated
Scaffold_2543	10763	Unannotated
Scaffold_2546	7358	Unannotated
Scaffold_2546	104350	Unannotated
Scaffold_2548	41006	Unannotated
Scaffold_2549	35628	Unannotated
Scaffold_2550	16546	Unannotated
Scaffold_2550	57759	Unannotated
Scaffold_2553	41610	Unannotated
Scaffold_2560	92902	Unannotated
Scaffold_2567	101576	Tyrosine/DOPA decarboxylase 5 [Includes: DOPA decarboxylase (DDC) (EC 4.1.1.28); Tyrosine decarboxylase (EC 4.1.1.25)]
Scaffold_2568	19238	Unannotated
Scaffold_2568	76976	Unannotated
Scaffold_2571	70594	Unannotated
Scaffold_2573	7244	Unannotated
Scaffold_2573	7682	Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic (EC 2.4.1.1) (Starch phosphorylase L-2)
Scaffold_2577	37036	UPF0603 protein OsI_019212, chloroplastic
Scaffold_2586	18302	12-oxophytodienoate reductase 2 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 2) (AtOPR2) (OPDA-reductase 2) (4,5-didehydrojasmonate reductase) (EC 1.3.1.-)
Scaffold_2586	18305	Unannotated
Scaffold_2586	89693	Unannotated
Scaffold_2590	55002	Unannotated
Scaffold_2590	92112	Unannotated
Scaffold_2604	46462	Unannotated
Scaffold_2606	26278	Unannotated
Scaffold_2607	18864	NADPH-dependent aldo-keto reductase, chloroplastic (AtChlAKR) (EC 1.1.1.-) (Aldo-keto reductase family 4 member C9)
Scaffold_2608	52945	Unannotated
Scaffold_2611	28305	Unannotated
Scaffold_2624	66925	T-complex protein 1 subunit beta (TCP-1-beta) (CCT-beta) (Chaperonin CCT2)
Scaffold_2632	86679	Unannotated
Scaffold_2645	57519	Unannotated
Scaffold_2646	49370	Unannotated
Scaffold_2646	49774	Histone-lysine N-methyltransferase ATXR3 (EC 2.1.1.43) (Protein SET DOMAIN GROUP 2) (Trithorax-related protein 3) (TRX-related protein 3)
Scaffold_2646	51483	Chorismate mutase 2 (AtCM2) (EC 5.4.99.5) (CM-2)
Scaffold_2646	55773	Unannotated
Scaffold_2646	80059	Unannotated
Scaffold_2651	30105	Calcium-dependent protein kinase 25 (OsCDPK25) (OsCPK25) (EC 2.7.11.1)
Scaffold_2659	713	Unannotated
Scaffold_2660	29172	Unannotated
Scaffold_2660	78880	Probable splicing factor 3A subunit 1
Scaffold_2677	5044	Probable splicing factor 3A subunit 1
Scaffold_2677	111488	Probable splicing factor 3A subunit 1
Scaffold_2677	138623	Unannotated
Scaffold_2679	15835	BTB/POZ domain-containing protein At3g09030
Scaffold_2679	43559	Unannotated
Scaffold_2679	50684	Unannotated
Scaffold_2681	54019	Unannotated
Scaffold_2683	65760	Unannotated
Scaffold_2683	80938	Unannotated
Scaffold_2683	100582	PAP-specific phosphatase HAL2-like (3'(2'),5'-bisphosphate nucleotidase) (EC 3.1.3.7) (3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase) (DPNPase) (Halotolerance protein)
Scaffold_2684	103964	Unannotated
Scaffold_2685	99882	Unannotated
Scaffold_2685	129310	Unannotated
Scaffold_2685	129574	Probable protein S-acyltransferase 14 (EC 2.3.1.225) (Probable palmitoyltransferase At3g60800) (Zinc finger DHHC domain-containing protein At3g60800)
Scaffold_2685	189696	Unannotated
Scaffold_2686	87908	Unannotated
Scaffold_2688	39307	Unannotated
Scaffold_2690	49921	Unannotated
Scaffold_2690	132757	Cytosolic enolase 3 (EC 4.2.1.11) (2-phospho-D-glycerate hydro-lyase 3) (2-phosphoglycerate dehydratase 3)
Scaffold_2692	136045	Unannotated
Scaffold_2693	147396	Unannotated
Scaffold_2694	22738	Unannotated
Scaffold_2695	158330	SEC1 family transport protein SLY1 (AtSLY1)
Scaffold_2695	243286	Unannotated
Scaffold_2695	243970	Unannotated
Scaffold_2695	244395	Unannotated
Scaffold_2696	20816	Unannotated
Scaffold_2696	54734	Unannotated
Scaffold_2696	88334	Probable glucan endo-1,3-beta-glucosidase A6 (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Anther-specific protein A6) (Beta-1,3-endoglucanase) (Protein MATERNAL EFFECT EMBRYO ARREST 48)
Scaffold_2696	88351	Unannotated
Scaffold_2697	26460	Unannotated
Scaffold_2697	161381	Unannotated
Scaffold_2697	161382	Unannotated
Scaffold_2698	44957	Unannotated
Scaffold_2698	45575	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_2698	45594	Unannotated
Scaffold_2698	52626	Unannotated
Scaffold_2698	99422	Unannotated
Scaffold_2698	132892	Unannotated
Scaffold_2698	136704	Unannotated
Scaffold_2698	139518	Unannotated
Scaffold_2698	191796	Unannotated
Scaffold_2699	178166	Unannotated
Scaffold_2699	221522	Unannotated
Scaffold_2702	41171	Unannotated
Scaffold_2704	35820	Unannotated
Scaffold_2704	35837	Unannotated
Scaffold_2706	551	Unannotated
Scaffold_2708	13218	Unannotated
Scaffold_2708	13239	Unannotated
Scaffold_2724	12171	Unannotated
Scaffold_2724	13119	Unannotated
Scaffold_2726	41465	CBS domain-containing protein CBSX6
Scaffold_2726	42632	Unannotated
Scaffold_2726	42669	Unannotated
Scaffold_2727	35297	Unannotated
Scaffold_2729	14845	Unannotated
Scaffold_2734	2778	Unannotated
Scaffold_2734	3095	Unannotated
Scaffold_2748	42949	Unannotated
Scaffold_2752	8515	Unannotated
Scaffold_2755	33321	Unannotated
Scaffold_2755	33812	Unannotated
Scaffold_2758	1711	Unannotated
Scaffold_2763	48349	Unannotated
Scaffold_2763	53212	Unannotated
Scaffold_2763	53258	Unannotated
Scaffold_2777	47421	Unannotated
Scaffold_2778	54508	Unannotated
Scaffold_2778	80095	Unannotated
Scaffold_2779	47745	Unannotated
Scaffold_2779	51264	Unannotated
Scaffold_2790	24426	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2790	24494	Unannotated
Scaffold_2790	24509	Unannotated
Scaffold_2790	24707	Unannotated
Scaffold_2790	24856	Unannotated
Scaffold_2790	24905	Unannotated
Scaffold_2790	25023	Unannotated
Scaffold_2790	25057	Unannotated
Scaffold_2790	25186	Unannotated
Scaffold_2790	25543	Unannotated
Scaffold_2790	25692	Unannotated
Scaffold_2790	25709	Unannotated
Scaffold_2790	25907	Unannotated
Scaffold_2790	25949	Unannotated
Scaffold_2790	25995	Unannotated
Scaffold_2792	31062	Unannotated
Scaffold_2801	2439	Unannotated
Scaffold_2801	3650	Unannotated
Scaffold_2801	3652	Unannotated
Scaffold_2801	4387	Unannotated
Scaffold_2802	42907	Unannotated
Scaffold_2808	2519	Unannotated
Scaffold_2809	5073	Unannotated
Scaffold_2811	8356	Unannotated
Scaffold_2839	7192	Unannotated
Scaffold_2839	22134	Unannotated
Scaffold_2840	10724	Unannotated
Scaffold_2849	6856	Unannotated
Scaffold_2849	47774	Unannotated
Scaffold_2849	47800	Nuclear pore complex protein NUP1 (Nuclear pore complex protein NUP136) (Nucleoporin 1) (Nucleoporin 136)
Scaffold_2856	16928	Unannotated
Scaffold_2866	22085	Unannotated
Scaffold_2880	34270	Unannotated
Scaffold_2881	64128	Unannotated
Scaffold_2882	25358	Acetolactate synthase small subunit 1, chloroplastic (Acetohydroxy-acid synthase small subunit) (AHAS) (ALS) (Protein valine-tolerant 1)
Scaffold_2882	27885	Unannotated
Scaffold_2885	681	Unannotated
Scaffold_2888	45593	Unannotated
Scaffold_2888	45667	Unannotated
Scaffold_2890	48151	50S ribosomal protein L36, chloroplastic
Scaffold_2890	52172	Unannotated
Scaffold_2895	11817	Unannotated
Scaffold_2905	45268	Unannotated
Scaffold_2905	45309	NADH-ubiquinone oxidoreductase chain 1 (EC 7.1.1.2) (NADH dehydrogenase subunit 1)
Scaffold_2905	45310	Unannotated
Scaffold_2905	45322	Unannotated
Scaffold_2905	45323	Unannotated
Scaffold_2905	45325	Unannotated
Scaffold_2905	45341	NADH-ubiquinone oxidoreductase chain 4 (EC 7.1.1.2) (NADH dehydrogenase subunit 4)
Scaffold_2905	45359	Unannotated
Scaffold_2905	45432	Unannotated
Scaffold_2905	45491	Unannotated
Scaffold_2905	45492	Photosystem II reaction center protein M (PSII-M)
Scaffold_2905	45493	Photosystem II reaction center protein M (PSII-M)
Scaffold_2910	21964	Photosystem II reaction center protein M (PSII-M)
Scaffold_2912	68783	Photosystem II reaction center protein M (PSII-M)
Scaffold_2916	3984	Photosystem II reaction center protein M (PSII-M)
Scaffold_2916	13985	Photosystem II reaction center protein M (PSII-M)
Scaffold_2920	35608	Unannotated
Scaffold_2921	42946	Unannotated
Scaffold_2922	47029	Unannotated
Scaffold_2928	31678	Unannotated
Scaffold_2929	44673	Unannotated
Scaffold_2930	37636	Unannotated
Scaffold_2933	17977	Unannotated
Scaffold_2938	44786	Unannotated
Scaffold_2938	44816	Unannotated
Scaffold_2938	46862	Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (AtRE2) [Includes: Protease RE2 (EC 3.4.23.-); Reverse transcriptase RE2 (EC 2.7.7.49); Endonuclease RE2]
Scaffold_2938	48191	Unannotated
Scaffold_2942	25425	Unannotated
Scaffold_2942	33420	Unannotated
Scaffold_2964	16100	Unannotated
Scaffold_2976	49395	Unannotated
Scaffold_2987	986	Unannotated
Scaffold_3010	22332	Unannotated
Scaffold_3010	49611	Unannotated
Scaffold_3010	49612	Unannotated
Scaffold_3010	49620	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3010	49696	Unannotated
Scaffold_3010	49704	Unannotated
Scaffold_3010	49705	Unannotated
Scaffold_3010	49742	Unannotated
Scaffold_3010	49756	Unannotated
Scaffold_3010	49764	Unannotated
Scaffold_3015	8730	Unannotated
Scaffold_3022	22079	Unannotated
Scaffold_3022	42366	Unannotated
Scaffold_3025	5275	Unannotated
Scaffold_3026	10328	Unannotated
Scaffold_3027	52500	Unannotated
Scaffold_3032	25523	Unannotated
Scaffold_3034	44782	Unannotated
Scaffold_3037	22381	UDP-glycosyltransferase 87A1 (EC 2.4.1.-)
Scaffold_3037	24994	Unannotated
Scaffold_3040	26884	Unannotated
Scaffold_3051	5303	Unannotated
Scaffold_3060	3807	Unannotated
Scaffold_3061	33686	Unannotated
Scaffold_3061	33725	Unannotated
Scaffold_3064	54936	Uncharacterized protein ORF91
Scaffold_3068	12835	Unannotated
Scaffold_3072	58093	Unannotated
Scaffold_3077	41457	Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter)
Scaffold_3078	7197	Unannotated
Scaffold_3082	15551	Unannotated
Scaffold_3082	15621	Unannotated
Scaffold_3082	15625	Unannotated
Scaffold_3082	15778	Unannotated
Scaffold_3084	47723	Unannotated
Scaffold_3088	47638	Unannotated
Scaffold_3088	47650	Unannotated
Scaffold_3090	26088	Unannotated
Scaffold_3090	26091	Unannotated
Scaffold_3090	26120	Unannotated
Scaffold_3090	26130	Unannotated
Scaffold_3090	26131	Unannotated
Scaffold_3112	20880	Unannotated
Scaffold_3113	46720	Unannotated
Scaffold_3115	11718	Unannotated
Scaffold_3115	23056	Unannotated
Scaffold_3117	26324	Unannotated
Scaffold_3118	54649	Unannotated
Scaffold_3122	47938	Unannotated
Scaffold_3123	60225	Unannotated
Scaffold_3128	412	Unannotated
Scaffold_3131	57387	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3131	57454	Unannotated
Scaffold_3136	43183	Cytochrome b6
Scaffold_3138	15079	Unannotated
Scaffold_3138	15080	Unannotated
Scaffold_3139	44872	Photosystem II D2 protein (PSII D2 protein) (EC 1.10.3.9) (Photosystem Q(A) protein)
Scaffold_3144	9005	Unannotated
Scaffold_3144	49625	Unannotated
Scaffold_3144	49626	Unannotated
Scaffold_3144	49665	Unannotated
Scaffold_3155	45783	Unannotated
Scaffold_3163	33369	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
Scaffold_3163	43810	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
Scaffold_3165	8001	Unannotated
Scaffold_3165	8006	Protein Ycf2
Scaffold_3165	8037	Unannotated
Scaffold_3165	42465	Unannotated
Scaffold_3166	51564	Unannotated
Scaffold_3170	22763	ATPase family AAA domain-containing protein FIGL1 (AAA-ATPase FIDGETIN-LIKE 1) (EC 3.6.4.-)
Scaffold_3170	22775	Unannotated
Scaffold_3172	16641	Unannotated
Scaffold_3177	43325	Unannotated
Scaffold_3177	43339	Unannotated
Scaffold_3177	43387	Unannotated
Scaffold_3177	63998	Unannotated
Scaffold_3177	64015	Unannotated
Scaffold_3183	16877	Unannotated
Scaffold_3183	16973	Unannotated
Scaffold_3183	17055	Unannotated
Scaffold_3183	17151	Unannotated
Scaffold_3192	6	Unannotated
Scaffold_3192	10	Unannotated
Scaffold_3192	26	Uncharacterized mitochondrial protein AtMg01060 (ORF107g)
Scaffold_3192	36	Uncharacterized mitochondrial protein AtMg01060 (ORF107g)
Scaffold_3192	63	Unannotated
Scaffold_3192	75	Unannotated
Scaffold_3192	99	Unannotated
Scaffold_3192	183	Unannotated
Scaffold_3207	25392	Unannotated
Scaffold_3209	26818	Unannotated
Scaffold_3209	26843	Unannotated
Scaffold_3209	26846	Unannotated
Scaffold_3209	26866	Unannotated
Scaffold_3209	26875	Unannotated
Scaffold_3209	26878	Unannotated
Scaffold_3209	26896	Unannotated
Scaffold_3209	26923	Unannotated
Scaffold_3209	26954	Unannotated
Scaffold_3212	32284	Unannotated
Scaffold_3215	5300	Unannotated
Scaffold_3222	80726	Unannotated
Scaffold_3222	81073	Unannotated
Scaffold_3225	15166	Unannotated
Scaffold_3225	15270	Unannotated
Scaffold_3225	15301	Unannotated
Scaffold_3225	15317	Unannotated
Scaffold_3225	15368	Unannotated
Scaffold_3225	15383	Unannotated
Scaffold_3225	15426	Unannotated
Scaffold_3226	48876	Unannotated
Scaffold_3228	29636	Unannotated
Scaffold_3229	28527	Unannotated
Scaffold_3234	21447	Unannotated
Scaffold_3243	73691	Unannotated
Scaffold_3244	18167	Unannotated
Scaffold_3244	18192	Unannotated
Scaffold_3244	18222	Unannotated
Scaffold_3244	18244	Unannotated
Scaffold_3248	35345	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3249	18073	Unannotated
Scaffold_3249	18146	Probable methyltransferase PMT16 (EC 2.1.1.-)
Scaffold_3249	18169	Mediator of RNA polymerase II transcription subunit 13 (Protein GRAND CENTRAL) (Protein MACCHI-BOU 2)
Scaffold_3251	472	Unannotated
Scaffold_3252	38964	Unannotated
Scaffold_3253	41849	Unannotated
Scaffold_3253	41940	Unannotated
Scaffold_3258	36788	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit H) (NADH-plastoquinone oxidoreductase 49 kDa subunit) (NADH-plastoquinone oxidoreductase subunit H)
Scaffold_3264	16243	Unannotated
Scaffold_3264	27443	Unannotated
Scaffold_3264	27777	Unannotated
Scaffold_3268	35897	Unannotated
Scaffold_3268	36187	Unannotated
Scaffold_3268	36267	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3268	42835	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3269	42392	Unannotated
Scaffold_3279	30551	Unannotated
Scaffold_3280	3887	Unannotated
Scaffold_3280	15067	Unannotated
Scaffold_3280	15071	Unannotated
Scaffold_3280	15074	Unannotated
Scaffold_3280	15083	Unannotated
Scaffold_3280	15087	Unannotated
Scaffold_3280	15101	Unannotated
Scaffold_3280	15108	Unannotated
Scaffold_3280	15118	Unannotated
Scaffold_3281	35145	Unannotated
Scaffold_3281	35146	Unannotated
Scaffold_3283	43427	Unannotated
Scaffold_3290	61482	Unannotated
Scaffold_3299	27203	Unannotated
Scaffold_3300	5905	Unannotated
Scaffold_3300	5906	Unannotated
Scaffold_3301	331	Unannotated
Scaffold_3303	1209	tRNA ligase 1 (AtRLG1) (AtRNL) (AtRlg1p) (EC 6.5.1.3) (Protein AT.I.24-9)
Scaffold_3303	1210	tRNA ligase 1 (AtRLG1) (AtRNL) (AtRlg1p) (EC 6.5.1.3) (Protein AT.I.24-9)
Scaffold_3306	39797	Unannotated
Scaffold_3307	60415	Unannotated
Scaffold_3307	60416	Unannotated
Scaffold_3307	60419	UDP-glucose 6-dehydrogenase 1 (UDP-Glc dehydrogenase 1) (UDP-GlcDH 1) (UDPGDH 1) (EC 1.1.1.22) (Gm-UGD1)
Scaffold_3307	60447	UDP-glucose 6-dehydrogenase 1 (UDP-Glc dehydrogenase 1) (UDP-GlcDH 1) (UDPGDH 1) (EC 1.1.1.22) (Gm-UGD1)
Scaffold_3307	60449	Unannotated
Scaffold_3312	18627	Unannotated
Scaffold_3312	18657	Unannotated
Scaffold_3326	44106	Unannotated
Scaffold_3333	48161	Unannotated
Scaffold_3340	42675	Unannotated
Scaffold_3350	79898	Unannotated
Scaffold_3353	22280	Unannotated
Scaffold_3358	4180	Unannotated
Scaffold_3360	41443	Unannotated
Scaffold_3360	41444	Unannotated
Scaffold_3361	26476	DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha)
Scaffold_3362	3264	Unannotated
Scaffold_3362	3411	Unannotated
Scaffold_3365	7775	Unannotated
Scaffold_3370	52287	Unannotated
Scaffold_3370	52292	COMPASS-like H3K4 histone methylase component WDR5A (AtWDR5A)
Scaffold_3376	41662	Unannotated
Scaffold_3376	41720	Unannotated
Scaffold_3378	15267	ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
Scaffold_3378	15290	Unannotated
Scaffold_3378	15407	Unannotated
Scaffold_3379	3285	Unannotated
Scaffold_3380	27226	Unannotated
Scaffold_3380	27407	Unannotated
Scaffold_3380	27408	Unannotated
Scaffold_3385	69291	Unannotated
Scaffold_3385	74469	Unannotated
Scaffold_3398	43043	Unannotated
Scaffold_3402	26583	Unannotated
Scaffold_3404	29167	Unannotated
Scaffold_3408	55659	Unannotated
Scaffold_3431	18507	Unannotated
Scaffold_3432	18912	Unannotated
Scaffold_3436	8963	Unannotated
Scaffold_3436	9048	Unannotated
Scaffold_3440	13758	Unannotated
Scaffold_3446	36086	Unannotated
Scaffold_3446	38339	Unannotated
Scaffold_3451	122	Ankyrin repeat protein SKIP35 (SKP1-interacting partner 35)
Scaffold_3452	2225	Unannotated
Scaffold_3461	55285	Unannotated
Scaffold_3463	68692	Unannotated
Scaffold_3463	73480	Unannotated
Scaffold_3463	73552	NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase, subunit 2 B) (NADH-plastoquinone oxidoreductase subunit 2 B)
Scaffold_3463	73905	Unannotated
Scaffold_3463	74150	Unannotated
Scaffold_3463	74266	Unannotated
Scaffold_3463	74447	Unannotated
Scaffold_3463	74498	Unannotated
Scaffold_3463	74625	Unannotated
Scaffold_3463	74976	Unannotated
Scaffold_3463	75034	Unannotated
Scaffold_3463	75087	Unannotated
Scaffold_3463	75554	Unannotated
Scaffold_3463	75564	Unannotated
Scaffold_3463	75580	Unannotated
Scaffold_3463	76271	Unannotated
Scaffold_3465	51209	Unannotated
Scaffold_3469	46144	Unannotated
Scaffold_3470	43909	Unannotated
Scaffold_3470	44023	Unannotated
Scaffold_3471	3325	Unannotated
Scaffold_3477	56386	Unannotated
Scaffold_3477	61786	Unannotated
Scaffold_3477	61899	Unannotated
Scaffold_3478	29671	Unannotated
Scaffold_3479	16159	DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta')
Scaffold_3481	28595	Putative ATP synthase protein YMF19 (EC 7.1.2.2) (Mitochondrial protein YMF19)
Scaffold_3487	17383	Putative ATP synthase protein YMF19 (EC 7.1.2.2) (Mitochondrial protein YMF19)
Scaffold_3488	46292	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1)
Scaffold_3489	4962	Unannotated
Scaffold_3492	5068	Unannotated
Scaffold_3492	5072	Unannotated
Scaffold_3492	6262	Unannotated
Scaffold_3498	21077	ATP synthase subunit alpha, mitochondrial
Scaffold_3504	2071	Unannotated
Scaffold_3504	22728	Unannotated
Scaffold_3505	37774	Unannotated
Scaffold_3505	37846	Serine carboxypeptidase-like 50 (EC 3.4.16.-)
Scaffold_3506	14179	Unannotated
Scaffold_3507	52658	Unannotated
Scaffold_3508	41840	Unannotated
Scaffold_3516	67707	Unannotated
Scaffold_3516	68398	Unannotated
Scaffold_3521	51242	Unannotated
Scaffold_3521	65099	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3521	65229	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3529	15579	Unannotated
Scaffold_3529	15588	Unannotated
Scaffold_3532	49187	Unannotated
Scaffold_3532	49212	Unannotated
Scaffold_3532	49216	Unannotated
Scaffold_3532	49469	Unannotated
Scaffold_3532	49542	Unannotated
Scaffold_3532	49696	Unannotated
Scaffold_3532	49706	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3533	16160	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3533	16168	Unannotated
Scaffold_3533	16169	Unannotated
Scaffold_3533	16174	Unannotated
Scaffold_3533	16182	Unannotated
Scaffold_3533	16183	Unannotated
Scaffold_3533	16197	Unannotated
Scaffold_3533	16201	Unannotated
Scaffold_3538	16464	Unannotated
Scaffold_3540	27165	Unannotated
Scaffold_3544	24367	Unannotated
Scaffold_3559	42357	Unannotated
Scaffold_3559	42415	Unannotated
Scaffold_3559	42605	Unannotated
Scaffold_3562	1049	Unannotated
Scaffold_3566	44550	Unannotated
Scaffold_3566	44631	Unannotated
Scaffold_3566	44660	Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein CP-47)
Scaffold_3572	13813	Unannotated
Scaffold_3572	13996	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3575	6910	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3576	23849	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3584	15255	Unannotated
Scaffold_3585	46409	Unannotated
Scaffold_3585	46786	Unannotated
Scaffold_3585	46804	Unannotated
Scaffold_3587	31958	Unannotated
Scaffold_3590	42945	NADH-ubiquinone oxidoreductase chain 3 (EC 7.1.1.2) (NADH dehydrogenase subunit 3)
Scaffold_3591	35790	Unannotated
Scaffold_3595	51986	ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV)
Scaffold_3595	51990	Unannotated
Scaffold_3595	51999	Unannotated
Scaffold_3595	52017	Unannotated
Scaffold_3597	27865	Unannotated
Scaffold_3601	15152	Unannotated
Scaffold_3603	15996	Unannotated
Scaffold_3603	16016	Unannotated
Scaffold_3603	16017	Unannotated
Scaffold_3603	16083	Unannotated
Scaffold_3603	16092	Unannotated
Scaffold_3605	9329	Unannotated
Scaffold_3609	31180	Unannotated
Scaffold_3612	7622	F-box/WD-40 repeat-containing protein At5g21040
Scaffold_3612	13864	Unannotated
Scaffold_3612	21988	Unannotated
Scaffold_3612	23757	Unannotated
Scaffold_3612	41613	Unannotated
Scaffold_3612	41646	Unannotated
Scaffold_3612	69674	Unannotated
Scaffold_3612	70005	Unannotated
Scaffold_3612	71305	Unannotated
Scaffold_3613	43961	Unannotated
Scaffold_3617	3518	Unannotated
Scaffold_3619	39899	Unannotated
Scaffold_3619	42567	Unannotated
Scaffold_3619	44387	Unannotated
Scaffold_3621	53331	Unannotated
Scaffold_3622	5196	Unannotated
Scaffold_3626	59495	Unannotated
Scaffold_3639	364	Unannotated
Scaffold_3639	12806	Unannotated
Scaffold_3639	12807	Unannotated
Scaffold_3645	34883	Unannotated
Scaffold_3651	3486	Unannotated
Scaffold_3652	60262	Unannotated
Scaffold_3660	15881	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3660	19925	Unannotated
Scaffold_3663	517	Unannotated
Scaffold_3664	16027	Unannotated
Scaffold_3664	16033	Unannotated
Scaffold_3665	2925	Unannotated
Scaffold_3669	7543	Unannotated
Scaffold_3669	23534	Unannotated
Scaffold_3672	677	Unannotated
Scaffold_3677	55830	Unannotated
Scaffold_3681	19120	Unannotated
Scaffold_3681	20006	Unannotated
Scaffold_3685	7643	Unannotated
Scaffold_3685	48411	Unannotated
Scaffold_3691	51822	Protein Ycf2
Scaffold_3692	48066	Unannotated
Scaffold_3692	48078	Unannotated
Scaffold_3692	48175	Unannotated
Scaffold_3702	12521	Unannotated
Scaffold_3703	16965	Unannotated
Scaffold_3704	32813	Unannotated
Scaffold_3704	32983	Unannotated
Scaffold_3707	10558	Pyruvate kinase isozyme A, chloroplastic (EC 2.7.1.40)
Scaffold_3707	10562	Unannotated
Scaffold_3707	10595	Unannotated
Scaffold_3708	22918	Unannotated
Scaffold_3708	23051	Unannotated
Scaffold_3708	23482	Unannotated
Scaffold_3708	23605	Unannotated
Scaffold_3708	23649	Unannotated
Scaffold_3708	23662	Unannotated
Scaffold_3711	45649	Unannotated
Scaffold_3717	17471	Unannotated
Scaffold_3725	36600	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3725	37027	Unannotated
Scaffold_3726	21162	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3726	22667	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3728	43518	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3736	45567	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3737	29613	Unannotated
Scaffold_3746	5322	60S ribosomal protein L16, mitochondrial
Scaffold_3746	6405	Glycosyltransferase family 92 protein RCOM_0530710 (EC 2.4.1.-)
Scaffold_3746	6921	Unannotated
Scaffold_3748	37315	Unannotated
Scaffold_3752	5351	Unannotated
Scaffold_3761	36855	Unannotated
Scaffold_3763	3693	Unannotated
Scaffold_3767	50566	Unannotated
Scaffold_3771	12553	Unannotated
Scaffold_3771	12835	Ribosomal protein S3, mitochondrial
Scaffold_3773	2486	Ribosomal protein S3, mitochondrial
Scaffold_3774	8415	Unannotated
Scaffold_3774	8484	Unannotated
Scaffold_3780	44368	Unannotated
Scaffold_3784	45593	Unannotated
Scaffold_3786	30323	Unannotated
Scaffold_3787	43883	Probable LRR receptor-like serine/threonine-protein kinase At2g16250 (EC 2.7.11.1)
Scaffold_3787	44085	Probable LRR receptor-like serine/threonine-protein kinase At2g16250 (EC 2.7.11.1)
Scaffold_3788	45383	Unannotated
Scaffold_3788	46872	Unannotated
Scaffold_3789	20867	Unannotated
Scaffold_3789	22595	Unannotated
Scaffold_3792	35050	Unannotated
Scaffold_3798	5901	Unannotated
Scaffold_3801	8042	Unannotated
Scaffold_3803	20484	Unannotated
Scaffold_3803	20581	Unannotated
Scaffold_3803	20678	Unannotated
Scaffold_3806	3711	Unannotated
Scaffold_3806	44116	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3806	44121	Unannotated
Scaffold_3806	44488	12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3811	59158	Unannotated
Scaffold_3822	1439	Unannotated
Scaffold_3824	10730	Unannotated
Scaffold_3824	10738	Unannotated
Scaffold_3824	10757	Unannotated
Scaffold_3824	10765	Unannotated
Scaffold_3824	10865	Unannotated
Scaffold_3832	18421	Unannotated
Scaffold_3832	18865	Unannotated
Scaffold_3834	31205	Unannotated
Scaffold_3841	45667	Unannotated
Scaffold_3843	32869	Unannotated
Scaffold_3854	39924	Unannotated
Scaffold_3854	39931	Unannotated
Scaffold_3855	72438	Unannotated
Scaffold_3856	70145	Unannotated
Scaffold_3858	23784	Unannotated
Scaffold_3858	23833	Unannotated
Scaffold_3870	41426	Unannotated
Scaffold_3872	48156	Ribosomal protein S3, mitochondrial
Scaffold_3874	46951	Unannotated
Scaffold_3874	47484	Unannotated
Scaffold_3877	39758	Unannotated
Scaffold_3878	32177	Unannotated
Scaffold_3882	33239	Unannotated
Scaffold_3883	5753	Unannotated
Scaffold_3889	62085	ATP synthase subunit beta, chloroplastic (EC 7.1.2.2) (ATP synthase F1 sector subunit beta) (F-ATPase subunit beta) (Fragment)
Scaffold_3893	3731	Unannotated
Scaffold_3894	19886	Unannotated
Scaffold_3894	33726	Unannotated
Scaffold_3898	24623	Unannotated
Scaffold_3905	43723	Unannotated
Scaffold_3906	16953	Unannotated
Scaffold_3906	35764	Unannotated
Scaffold_3910	38000	Unannotated
Scaffold_3910	38004	Unannotated
Scaffold_3910	39648	Unannotated
Scaffold_3913	5615	Unannotated
Scaffold_3913	5616	Beta-amylase 3, chloroplastic (EC 3.2.1.2) (1,4-alpha-D-glucan maltohydrolase) (Beta-amylase 8) (Chloroplast beta-amylase) (CT-BMY)
Scaffold_3919	56833	Unannotated
Scaffold_3920	4548	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 (EC 1.6.99.3) (EC 7.1.1.2) (NADH dehydrogenase subunit 7)
Scaffold_3928	29956	Unannotated
Scaffold_3929	48718	Unannotated
Scaffold_3929	48723	Unannotated
Scaffold_3929	48732	Unannotated
Scaffold_3931	1753	Unannotated
Scaffold_3931	1754	Unannotated
Scaffold_3934	11374	Unannotated
Scaffold_3937	15907	Unannotated
Scaffold_3954	35642	Unannotated
Scaffold_3957	14309	Unannotated
Scaffold_3957	17311	Unannotated
Scaffold_3961	56541	Unannotated
Scaffold_3969	45336	Unannotated
Scaffold_3971	25103	Unannotated
Scaffold_3971	25117	Unannotated
Scaffold_3975	35860	Serine/threonine-protein phosphatase PP1 isozyme 4 (EC 3.1.3.16) (Type one protein phosphatase 4)
Scaffold_3978	6196	Unannotated
Scaffold_3985	4805	Unannotated
Scaffold_3988	8694	Unannotated
Scaffold_3990	5525	Unannotated
Scaffold_3993	6452	Unannotated
Scaffold_4005	48203	Unannotated
Scaffold_4005	48283	Unannotated
Scaffold_4005	48303	Phosphate transporter PHO1 homolog 3 (Protein PHO1 homolog 3) (AtPHO1;H3)
Scaffold_4005	48397	Unannotated
Scaffold_4007	22933	Unannotated
Scaffold_4013	19074	Protein transport protein SEC13 homolog B (SEC13-like protein B)
Scaffold_2	59120	Unannotated
Scaffold_2	188661	Unannotated
Scaffold_2	227429	Unannotated
Scaffold_2	345924	Unannotated
Scaffold_2	1129264	Unannotated
Scaffold_2	2103382	Unannotated
Scaffold_2	2155349	Unannotated
Scaffold_2	2210250	Unannotated
Scaffold_2	2442747	Unannotated
Scaffold_2	2584106	Unannotated
Scaffold_2	2839043	Unannotated
Scaffold_4	210910	Unannotated
Scaffold_4	215354	LRR receptor-like serine/threonine-protein kinase (EC 2.7.11.1) (LRR receptor-like serine/threonine-protein kinase At4g26540) (Protein RECEPTOR OF RGF1) (Protein RGF1 INSENSITIVE 3)
Scaffold_4	215381	Unannotated
Scaffold_4	215385	Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790
Scaffold_4	243952	Unannotated
Scaffold_4	261784	Unannotated
Scaffold_4	341704	Unannotated
Scaffold_4	848627	Unannotated
Scaffold_4	1103874	Unannotated
Scaffold_4	1777860	Unannotated
Scaffold_4	1777959	Unannotated
Scaffold_4	1968412	Unannotated
Scaffold_4	2141109	Unannotated
Scaffold_4	2291953	Unannotated
Scaffold_5	860102	Probable 2-oxoglutarate-dependent dioxygenase JRG21 (EC 1.14.11.-) (Protein JASMONATE-REGULATED GENE 21)
Scaffold_5	968859	Probable LRR receptor-like serine/threonine-protein kinase IRK (EC 2.7.11.1) (Inflorescence and root apices receptor-like kinase)
Scaffold_5	968887	Unannotated
Scaffold_5	992602	Galactan beta-1,4-galactosyltransferase GALS3 (EC 2.4.1.-) (Beta-1,4-galactan synthase) (Galactan synthase 3)
Scaffold_5	997645	Galactan beta-1,4-galactosyltransferase GALS3 (EC 2.4.1.-) (Beta-1,4-galactan synthase) (Galactan synthase 3)
Scaffold_5	1265637	Unannotated
Scaffold_5	1707925	Unannotated
Scaffold_5	1715493	Linoleate 9S-lipoxygenase 6 (EC 1.13.11.58) (Lipoxygenase 1-5) (StLOX1) (lox1:St:3) (Fragment)
Scaffold_6	174667	Unannotated
Scaffold_6	174670	Unannotated
Scaffold_6	174702	Unannotated
Scaffold_6	174704	Unannotated
Scaffold_6	270879	Unannotated
Scaffold_6	413030	Unannotated
Scaffold_6	413659	Unannotated
Scaffold_6	957165	Serine/threonine-protein kinase VPS15 (EC 2.7.11.1) (Vacuolar protein sorting-associated protein 15) (AtVPS15)
Scaffold_6	1207714	Unannotated
Scaffold_6	1554140	Unannotated
Scaffold_6	1689710	Unannotated
Scaffold_6	1736007	Unannotated
Scaffold_6	2076608	Unannotated
Scaffold_6	2251998	Unannotated
Scaffold_7	19684	Unannotated
Scaffold_7	721108	Unannotated
Scaffold_7	850335	Unannotated
Scaffold_7	850435	Unannotated
Scaffold_7	1082025	Unannotated
Scaffold_7	1298871	Unannotated
Scaffold_7	1475386	Unannotated
Scaffold_7	1475387	Unannotated
Scaffold_7	1492420	Unannotated
Scaffold_7	1631649	Unannotated
Scaffold_7	1664934	Unannotated
Scaffold_7	1873579	Unannotated
Scaffold_7	1879437	Unannotated
Scaffold_8	4985	Unannotated
Scaffold_8	303967	Unannotated
Scaffold_8	303968	Unannotated
Scaffold_8	479947	Unannotated
Scaffold_8	709807	Unannotated
Scaffold_8	709808	Unannotated
Scaffold_8	958270	Unannotated
Scaffold_8	1969697	Unannotated
Scaffold_8	2147083	Unannotated
Scaffold_8	2147084	Unannotated
Scaffold_8	2147578	Unannotated
Scaffold_8	2165242	Unannotated
Scaffold_8	2255037	Fructose-1,6-bisphosphatase, chloroplastic (FBPase) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase)
Scaffold_8	2255039	Fructose-1,6-bisphosphatase, chloroplastic (FBPase) (EC 3.1.3.11) (D-fructose-1,6-bisphosphate 1-phosphohydrolase)
Scaffold_8	2352814	Unannotated
Scaffold_8	2400901	Unannotated
Scaffold_8	2531355	Subtilisin-like protease SBT1.5 (EC 3.4.21.-) (Subtilase subfamily 1 member 5) (AtSBT1.5)
Scaffold_8	2531357	Subtilisin-like protease SBT1.5 (EC 3.4.21.-) (Subtilase subfamily 1 member 5) (AtSBT1.5)
Scaffold_8	2873060	Subtilisin-like protease SBT1.5 (EC 3.4.21.-) (Subtilase subfamily 1 member 5) (AtSBT1.5)
Scaffold_8	2874766	Unannotated
Scaffold_9	346245	Unannotated
Scaffold_9	346246	Unannotated
Scaffold_9	592898	Unannotated
Scaffold_9	592900	Unannotated
Scaffold_9	1130416	Unannotated
Scaffold_9	1261172	Unannotated
Scaffold_9	1500186	ARF guanine-nucleotide exchange factor GNOM (Pattern formation protein EMB30) (Protein EMBRYO DEFECTIVE 30) (Protein MIZU-KUSSEI2) (Protein VASCULAR NETWORK 7)
Scaffold_9	1500187	ARF guanine-nucleotide exchange factor GNOM (Pattern formation protein EMB30) (Protein EMBRYO DEFECTIVE 30) (Protein MIZU-KUSSEI2) (Protein VASCULAR NETWORK 7)
Scaffold_9	1500286	Unannotated
Scaffold_9	1500288	Unannotated
Scaffold_9	1850310	Unannotated
Scaffold_9	1900522	Unannotated
Scaffold_10	37947	Unannotated
Scaffold_10	94872	Unannotated
Scaffold_10	157917	Unannotated
Scaffold_10	213231	Unannotated
Scaffold_10	226048	Unannotated
Scaffold_10	226050	Unannotated
Scaffold_10	436925	Unannotated
Scaffold_10	493277	Unannotated
Scaffold_10	597722	Unannotated
Scaffold_10	621223	Unannotated
Scaffold_10	630797	Protein RDM16 (Pre-mRNA-splicing factor RDM16) (Protein RNA-directed DNA methylation 16)
Scaffold_10	709663	Unannotated
Scaffold_10	709763	Unannotated
Scaffold_10	827320	Unannotated
Scaffold_11	190692	Unannotated
Scaffold_11	550117	Unannotated
Scaffold_11	620103	Unannotated
Scaffold_11	751136	Unannotated
Scaffold_11	829365	Transcription termination factor MTERF6, chloroplastic/mitochondrial (Mitochondrial transcription termination factor 6) (Protein PIGMENT DEFECTIVE 191)
Scaffold_11	829368	Unannotated
Scaffold_11	867587	Unannotated
Scaffold_11	867588	Unannotated
Scaffold_11	988062	Unannotated
Scaffold_11	1130271	Unannotated
Scaffold_11	1467020	Unannotated
Scaffold_11	1467021	Unannotated
Scaffold_11	1541258	Unannotated
Scaffold_11	1570801	Unannotated
Scaffold_11	1628531	Unannotated
Scaffold_11	1628532	Unannotated
Scaffold_11	1658979	Unannotated
Scaffold_11	1669369	Unannotated
Scaffold_11	1788460	Unannotated
Scaffold_11	1842491	Unannotated
Scaffold_11	2083108	Unannotated
Scaffold_11	2296153	Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 (EC 2.7.10.1) (Protein PXY/TDR-CORRELATED 3)
Scaffold_11	2315216	Unannotated
Scaffold_11	2326724	Unannotated
Scaffold_12	57673	Unannotated
Scaffold_12	57674	Unannotated
Scaffold_12	194732	Unannotated
Scaffold_12	219942	Unannotated
Scaffold_12	338749	Unannotated
Scaffold_12	339218	Unannotated
Scaffold_12	339219	Unannotated
Scaffold_12	358446	Unannotated
Scaffold_12	359361	Unannotated
Scaffold_12	359523	Unannotated
Scaffold_12	497336	Unannotated
Scaffold_12	788453	Unannotated
Scaffold_12	874769	O-fucosyltransferase 35 (O-FucT-35) (EC 2.4.1.-) (O-fucosyltransferase family protein)
Scaffold_12	944770	O-fucosyltransferase 35 (O-FucT-35) (EC 2.4.1.-) (O-fucosyltransferase family protein)
Scaffold_12	1092020	O-fucosyltransferase 35 (O-FucT-35) (EC 2.4.1.-) (O-fucosyltransferase family protein)
Scaffold_12	1284076	Unannotated
Scaffold_12	2102958	Unannotated
Scaffold_12	2102959	Unannotated
Scaffold_12	2402501	Unannotated
Scaffold_12	2481318	Unannotated
Scaffold_12	2481320	Unannotated
Scaffold_12	2781754	Unannotated
Scaffold_12	3228370	Unannotated
Scaffold_12	3436812	3-oxo-Delta(4,5)-steroid 5-beta-reductase (EC 1.3.1.3) (Delta(4)-3-oxosteroid 5-beta-reductase) (Delta-4,5-steroid 5-beta-reductase) (At5beta-StR) (Progesterone 5-beta-reductase) (5beta-POR) (Protein VEIN PATTERNING 1)
Scaffold_12	3820474	Unannotated
Scaffold_12	3838668	Unannotated
Scaffold_12	4179020	Unannotated
Scaffold_12	4208838	Unannotated
Scaffold_13	23130	Unannotated
Scaffold_13	77534	Unannotated
Scaffold_13	173885	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_13	249324	Unannotated
Scaffold_13	251109	Unannotated
Scaffold_13	251111	Unannotated
Scaffold_13	251211	Unannotated
Scaffold_13	263851	Unannotated
Scaffold_13	913273	Unannotated
Scaffold_13	914291	Unannotated
Scaffold_13	963756	Alanine--tRNA ligase (EC 6.1.1.7) (Alanyl-tRNA synthetase) (AlaRS)
Scaffold_13	1337120	Unannotated
Scaffold_13	1824562	Unannotated
Scaffold_13	2085707	Unannotated
Scaffold_13	2264830	Unannotated
Scaffold_13	2297954	Unannotated
Scaffold_13	2299246	Unannotated
Scaffold_13	2430961	Unannotated
Scaffold_13	2434720	Unannotated
Scaffold_13	2434721	Unannotated
Scaffold_13	2434820	Unannotated
Scaffold_13	2434821	Unannotated
Scaffold_13	2715030	Unannotated
Scaffold_13	2815476	Unannotated
Scaffold_13	2851846	Unannotated
Scaffold_13	3101956	DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.4.13)
Scaffold_13	3269439	DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.4.13)
Scaffold_13	3269541	DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.4.13)
Scaffold_13	3396056	DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.4.13)
Scaffold_13	3396156	DEAD-box ATP-dependent RNA helicase 30 (EC 3.6.4.13)
Scaffold_13	3405568	Unannotated
Scaffold_13	3405570	Unannotated
Scaffold_13	3411986	Unannotated
Scaffold_13	3419538	Unannotated
Scaffold_13	3497423	Unannotated
Scaffold_13	3505455	Unannotated
Scaffold_13	3508393	Unannotated
Scaffold_14	96177	Unannotated
Scaffold_14	487871	Unannotated
Scaffold_14	690175	Unannotated
Scaffold_14	1356309	Unannotated
Scaffold_14	1818626	Unannotated
Scaffold_14	1838567	Unannotated
Scaffold_14	1940908	Unannotated
Scaffold_14	2278083	Unannotated
Scaffold_15	144725	Unannotated
Scaffold_15	428597	Violaxanthin de-epoxidase, chloroplastic (EC 1.23.5.1)
Scaffold_15	863093	Unannotated
Scaffold_15	1219791	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_15	1219792	Eukaryotic initiation factor 4A-8 (eIF-4A-8) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A-8)
Scaffold_15	1366301	Unannotated
Scaffold_15	1378876	Unannotated
Scaffold_15	1378879	Unannotated
Scaffold_15	1382206	Unannotated
Scaffold_15	1382208	Unannotated
Scaffold_15	1482292	Unannotated
Scaffold_15	1921218	Unannotated
Scaffold_15	2240056	Unannotated
Scaffold_15	2249138	Unannotated
Scaffold_16	109675	Unannotated
Scaffold_16	109676	Unannotated
Scaffold_16	208108	Unannotated
Scaffold_16	333082	Unannotated
Scaffold_16	1131591	Unannotated
Scaffold_16	1131592	Unannotated
Scaffold_16	1195341	Unannotated
Scaffold_16	1210606	Unannotated
Scaffold_16	1308684	Unannotated
Scaffold_16	1312501	Unannotated
Scaffold_16	1312868	Unannotated
Scaffold_16	1312869	Unannotated
Scaffold_16	1318946	Unannotated
Scaffold_16	1499543	Unannotated
Scaffold_16	1599996	Unannotated
Scaffold_16	1657033	Pentatricopeptide repeat-containing protein At1g79080, chloroplastic
Scaffold_16	1915451	Unannotated
Scaffold_16	1915548	Unannotated
Scaffold_16	1939359	Unannotated
Scaffold_17	464338	Unannotated
Scaffold_17	563446	Unannotated
Scaffold_17	840923	Unannotated
Scaffold_17	987577	2-hydroxyisoflavanone dehydratase (EC 3.1.1.1) (EC 4.2.1.105) (Carboxylesterase HIDM)
Scaffold_17	1434052	Unannotated
Scaffold_17	1609845	Unannotated
Scaffold_17	1609847	Unannotated
Scaffold_17	1737108	Unannotated
Scaffold_18	116056	Unannotated
Scaffold_18	498631	Unannotated
Scaffold_18	498633	DEAD-box ATP-dependent RNA helicase 27 (EC 3.6.4.13)
Scaffold_18	540647	Unannotated
Scaffold_18	1087663	Unannotated
Scaffold_18	1162982	Unannotated
Scaffold_18	1309664	Unannotated
Scaffold_18	1574913	Unannotated
Scaffold_18	1612242	Unannotated
Scaffold_18	1682098	Unannotated
Scaffold_18	1726750	Unannotated
Scaffold_18	2134355	Unannotated
Scaffold_18	2142430	NAD kinase 2, chloroplastic (AtNADK-2) (EC 2.7.1.23)
Scaffold_18	2656242	Unannotated
Scaffold_19	18735	Unannotated
Scaffold_19	1319419	Unannotated
Scaffold_19	1495579	Unannotated
Scaffold_19	1875287	Receptor-like protein EIX2 (EIX receptor 2)
Scaffold_20	19160	Unannotated
Scaffold_20	168870	Unannotated
Scaffold_20	269583	Unannotated
Scaffold_20	269586	Unannotated
Scaffold_20	271640	Phospholipase A I (AtPLA1) (EC 3.1.1.-)
Scaffold_20	1024576	Unannotated
Scaffold_20	2052006	Unannotated
Scaffold_20	2052527	Unannotated
Scaffold_21	820553	Unannotated
Scaffold_21	1269053	Unannotated
Scaffold_21	1564574	Unannotated
Scaffold_21	2063416	Unannotated
Scaffold_21	2230346	Unannotated
Scaffold_21	2230347	Unannotated
Scaffold_22	166827	Unannotated
Scaffold_22	560098	Unannotated
Scaffold_22	560198	Tubulin alpha-3 chain
Scaffold_22	575989	Unannotated
Scaffold_22	656864	Unannotated
Scaffold_22	656865	Unannotated
Scaffold_22	858307	Unannotated
Scaffold_22	988571	Unannotated
Scaffold_22	988599	Unannotated
Scaffold_22	988770	Unannotated
Scaffold_22	1432436	Unannotated
Scaffold_22	1747788	Unannotated
Scaffold_22	1747789	Unannotated
Scaffold_22	1793086	Unannotated
Scaffold_22	1847149	Unannotated
Scaffold_22	1873379	Unannotated
Scaffold_22	1899073	Unannotated
Scaffold_22	1976257	Unannotated
Scaffold_22	2284839	Unannotated
Scaffold_22	2694246	Unannotated
Scaffold_23	513493	Unannotated
Scaffold_23	776959	Unannotated
Scaffold_23	832982	Crocetin glucosyltransferase, chloroplastic (EC 2.4.1.271) (UDP-glucose glucosyltransferase 1) (GjUGT1) (UDP-glycosyltransferase 75L6)
Scaffold_23	840908	Receptor-like kinase TMK4 (EC 2.7.11.1) (BAK1-associating receptor-like kinase 1) (Leucine-rich repeat receptor-like kinases TMK4) (Transmembrane kinase 4)
Scaffold_23	1465914	Unannotated
Scaffold_23	1485565	Unannotated
Scaffold_23	1485859	Unannotated
Scaffold_23	1671269	Unannotated
Scaffold_23	2073337	Unannotated
Scaffold_24	386308	Unannotated
Scaffold_24	386309	Probable LRR receptor-like serine/threonine-protein kinase At1g06840 (EC 2.7.11.1)
Scaffold_24	506099	Pentatricopeptide repeat-containing protein At4g02750
Scaffold_24	718684	Unannotated
Scaffold_24	838704	Unannotated
Scaffold_24	838705	Unannotated
Scaffold_24	1315956	Unannotated
Scaffold_24	1599112	Unannotated
Scaffold_24	1599113	Unannotated
Scaffold_24	1599212	Unannotated
Scaffold_24	1599213	Unannotated
Scaffold_24	1683759	Unannotated
Scaffold_24	1683760	Unannotated
Scaffold_24	2008552	Unannotated
Scaffold_25	129541	Unannotated
Scaffold_25	309312	Unannotated
Scaffold_25	309776	Unannotated
Scaffold_25	722978	Unannotated
Scaffold_25	896926	Unannotated
Scaffold_25	1212809	Unannotated
Scaffold_25	1268088	Unannotated
Scaffold_25	1312645	Unannotated
Scaffold_25	1511033	Unannotated
Scaffold_26	740278	Unannotated
Scaffold_26	1017522	Unannotated
Scaffold_26	1648914	Unannotated
Scaffold_26	1648915	Unannotated
Scaffold_26	1766153	Unannotated
Scaffold_26	1851913	Aminomethyltransferase, mitochondrial (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT)
Scaffold_26	1990181	Unannotated
Scaffold_27	203686	Unannotated
Scaffold_27	348016	Unannotated
Scaffold_27	495357	Unannotated
Scaffold_27	643357	Unannotated
Scaffold_27	990162	Unannotated
Scaffold_27	1550908	Uncharacterized TPR repeat-containing protein At1g05150
Scaffold_27	1551007	Eukaryotic initiation factor 4A-1 (eIF-4A-1) (EC 3.6.4.13) (ATP-dependent RNA helicase eIF4A-1) (DEAD-box ATP-dependent RNA helicase 4)
Scaffold_27	1551008	Unannotated
Scaffold_27	1692371	Unannotated
Scaffold_27	1787516	Unannotated
Scaffold_28	250036	Unannotated
Scaffold_28	464872	Unannotated
Scaffold_28	575582	Unannotated
Scaffold_28	575683	Unannotated
Scaffold_28	754768	Unannotated
Scaffold_28	802131	Unannotated
Scaffold_28	912449	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 (OsLecRK3) (EC 2.7.11.1) (OsRLCK135)
Scaffold_28	912450	Unannotated
Scaffold_28	964411	Unannotated
Scaffold_28	1465888	Unannotated
Scaffold_28	1828146	Unannotated
Scaffold_29	25600	Unannotated
Scaffold_29	198859	Pentatricopeptide repeat-containing protein At5g39980, chloroplastic
Scaffold_29	908133	Alpha-glucan water dikinase, chloroplastic (EC 2.7.9.4) (Starch-related protein R1)
Scaffold_29	985496	Unannotated
Scaffold_29	1318174	Unannotated
Scaffold_29	1417020	Unannotated
Scaffold_29	1496694	Unannotated
Scaffold_29	1599968	Unannotated
Scaffold_29	1599969	Unannotated
Scaffold_30	186085	Unannotated
Scaffold_30	186086	Unannotated
Scaffold_30	511988	Unannotated
Scaffold_30	514886	Unannotated
Scaffold_30	818457	Unannotated
Scaffold_30	1199016	Unannotated
Scaffold_30	1532576	Unannotated
Scaffold_31	766158	Unannotated
Scaffold_31	796224	Unannotated
Scaffold_31	796255	Unannotated
Scaffold_31	857421	Unannotated
Scaffold_31	1299580	Unannotated
Scaffold_31	1563377	Unannotated
Scaffold_32	175087	Unannotated
Scaffold_32	585632	Unannotated
Scaffold_32	595768	Unannotated
Scaffold_32	979484	Unannotated
Scaffold_32	979485	Unannotated
Scaffold_32	979585	Unannotated
Scaffold_32	983295	4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic (HTPA synthase) (EC 4.3.3.7)
Scaffold_33	221204	Unannotated
Scaffold_33	221205	DnaJ homolog subfamily C GRV2 (Protein GRAVITROPISM DEFECTIVE 2) (Protein GREEN FLUORESCENT SEED 2) (Protein KATAMARI2)
Scaffold_33	224893	Unannotated
Scaffold_33	447090	Unannotated
Scaffold_33	447091	Unannotated
Scaffold_33	574909	Unannotated
Scaffold_33	864472	Unannotated
Scaffold_33	947046	Unannotated
Scaffold_33	969875	Unannotated
Scaffold_33	1058102	Unannotated
Scaffold_33	1580013	Unannotated
Scaffold_33	1651477	Unannotated
Scaffold_33	1651478	Unannotated
Scaffold_33	1651577	Receptor-like protein kinase 7 (EC 2.7.11.1)
Scaffold_33	1651579	Unannotated
Scaffold_33	1900660	Unannotated
Scaffold_33	1921846	Unannotated
Scaffold_33	1938140	Unannotated
Scaffold_34	37749	Unannotated
Scaffold_34	59490	Unannotated
Scaffold_34	1164600	Unannotated
Scaffold_34	1444463	Unannotated
Scaffold_34	1633703	Unannotated
Scaffold_35	705011	Unannotated
Scaffold_35	705012	Unannotated
Scaffold_35	740554	Unannotated
Scaffold_35	1029542	Probable UDP-arabinopyranose mutase 5 (EC 5.4.99.30) (Reversibly glycosylated polypeptide 5) (AtRGP5) (UDP-L-arabinose mutase 5)
Scaffold_35	1033265	Unannotated
Scaffold_35	1095980	Unannotated
Scaffold_35	1103658	Unannotated
Scaffold_35	1103758	Unannotated
Scaffold_35	1104639	Unannotated
Scaffold_35	1524875	Unannotated
Scaffold_35	1524876	Unannotated
Scaffold_35	1524976	Unannotated
Scaffold_35	1558133	Unannotated
Scaffold_36	18646	Unannotated
Scaffold_36	75655	Unannotated
Scaffold_36	256161	Unannotated
Scaffold_36	402035	Unannotated
Scaffold_36	898569	Unannotated
Scaffold_36	1039902	Unannotated
Scaffold_36	1060441	Unannotated
Scaffold_36	1247937	Unannotated
Scaffold_36	1247938	MACPF domain-containing protein CAD1 (Protein CONSTITUTIVELY ACTIVATED CELL DEATH 1) (Protein CAD1)
Scaffold_36	1423060	Unannotated
Scaffold_36	1676299	Unannotated
Scaffold_36	1800826	Unannotated
Scaffold_37	449183	Unannotated
Scaffold_37	1445023	Unannotated
Scaffold_38	92972	Unannotated
Scaffold_38	329369	Unannotated
Scaffold_38	329469	Unannotated
Scaffold_38	547322	Unannotated
Scaffold_38	551841	Unannotated
Scaffold_38	1525105	Unannotated
Scaffold_38	1676857	Unannotated
Scaffold_38	1722691	Unannotated
Scaffold_38	1722692	Unannotated
Scaffold_38	2064067	Unannotated
Scaffold_38	2157024	Unannotated
Scaffold_40	210220	Unannotated
Scaffold_40	210222	Unannotated
Scaffold_40	354599	Unannotated
Scaffold_40	513482	Unannotated
Scaffold_40	513483	Unannotated
Scaffold_40	513582	Unannotated
Scaffold_40	766160	Interactor of constitutive active ROPs 1 (ROP-interactive partner 1)
Scaffold_40	807892	Unannotated
Scaffold_40	1087065	Unannotated
Scaffold_40	1267432	Unannotated
Scaffold_40	1293979	Unannotated
Scaffold_40	1294000	Unannotated
Scaffold_40	1333949	Unannotated
Scaffold_40	1333950	Unannotated
Scaffold_40	1410379	Unannotated
Scaffold_40	1526711	Unannotated
Scaffold_40	1526844	Unannotated
Scaffold_41	32699	Unannotated
Scaffold_41	145954	Unannotated
Scaffold_41	145956	Unannotated
Scaffold_41	204782	Unannotated
Scaffold_41	204783	Unannotated
Scaffold_41	315897	Unannotated
Scaffold_41	610881	Unannotated
Scaffold_41	613799	Unannotated
Scaffold_41	1198102	Unannotated
Scaffold_41	1198103	Unannotated
Scaffold_41	1198218	Unannotated
Scaffold_41	1236549	Unannotated
Scaffold_41	1329998	Unannotated
Scaffold_41	1330000	Unannotated
Scaffold_41	1559602	Unannotated
Scaffold_41	1753524	Unannotated
Scaffold_41	1907412	Unannotated
Scaffold_42	91313	Unannotated
Scaffold_42	99938	Unannotated
Scaffold_42	100038	Unannotated
Scaffold_42	190051	Unannotated
Scaffold_42	394706	Unannotated
Scaffold_42	441390	Unannotated
Scaffold_42	1384943	Unannotated
Scaffold_42	1449860	Unannotated
Scaffold_43	5336	Receptor-like protein kinase HAIKU2 (EC 2.7.11.1)
Scaffold_43	53345	Unannotated
Scaffold_43	65137	Unannotated
Scaffold_43	73595	Unannotated
Scaffold_43	88555	Unannotated
Scaffold_43	473286	Unannotated
Scaffold_43	473386	Unannotated
Scaffold_43	592751	Unannotated
Scaffold_43	628759	Unannotated
Scaffold_43	692317	Unannotated
Scaffold_43	784567	Unannotated
Scaffold_43	864632	TMV resistance protein N
Scaffold_43	864633	Nucleosome assembly protein 1;2 (NtNAP1;2) (Nucleosome assembly protein 1-like 2) (NtNAP1_L2)
Scaffold_43	1220119	Unannotated
Scaffold_43	1225212	Unannotated
Scaffold_43	1322812	Unannotated
Scaffold_43	1743700	Unannotated
Scaffold_43	1743701	Unannotated
Scaffold_43	1754280	Unannotated
Scaffold_44	33633	Unannotated
Scaffold_44	281585	Unannotated
Scaffold_44	497016	Unannotated
Scaffold_44	585315	Unannotated
Scaffold_44	585316	Eukaryotic translation initiation factor isoform 4G-1 (eIF(iso)-4G-1) (eIF(iso)4G-1) (Eukaryotic initiation factor iso-4F subunit p82) (eIF-(iso)4F p82 subunit)
Scaffold_44	627651	Unannotated
Scaffold_44	651434	Unannotated
Scaffold_44	691151	Unannotated
Scaffold_44	705492	Unannotated
Scaffold_44	724011	Unannotated
Scaffold_44	724129	Unannotated
Scaffold_44	905342	L-lactate dehydrogenase A (LDH-A) (EC 1.1.1.27)
Scaffold_44	1200579	L-lactate dehydrogenase A (LDH-A) (EC 1.1.1.27)
Scaffold_44	1337628	Histone H3.2 (Histone H3.1) (Major histone H3)
Scaffold_44	1745627	Unannotated
Scaffold_45	68793	Unannotated
Scaffold_45	681277	Unannotated
Scaffold_45	975651	Unannotated
Scaffold_45	1270806	Unannotated
Scaffold_45	1270808	Unannotated
Scaffold_45	1498005	Probable solanesyl-diphosphate synthase 3, chloroplastic (OsSPS3) (EC 2.5.1.84) (Probable all-trans-nonaprenyl-diphosphate synthase 3 (geranyl-diphosphate specific))
Scaffold_45	1720622	Unannotated
Scaffold_45	1720623	Unannotated
Scaffold_46	117851	Unannotated
Scaffold_46	117852	Glutamyl-tRNA reductase 1, chloroplastic (GluTR) (EC 1.2.1.70)
Scaffold_46	517076	Unannotated
Scaffold_46	542505	Unannotated
Scaffold_46	542506	Unannotated
Scaffold_46	570046	Unannotated
Scaffold_46	665449	Unannotated
Scaffold_46	889670	Unannotated
Scaffold_46	1075323	Sodium/calcium exchanger NCL (Na(+)/Ca(2+)-exchange protein NCL) (Protein NCX-like) (AtNCL)
Scaffold_46	1097444	Sodium/calcium exchanger NCL (Na(+)/Ca(2+)-exchange protein NCL) (Protein NCX-like) (AtNCL)
Scaffold_46	1106560	Unannotated
Scaffold_46	1167601	Unannotated
Scaffold_46	1509858	Unannotated
Scaffold_46	1788272	Unannotated
Scaffold_46	1788872	Unannotated
Scaffold_47	156846	L-type lectin-domain containing receptor kinase S.4 (LecRK-S.4) (EC 2.7.11.1)
Scaffold_47	736520	Unannotated
Scaffold_47	913817	Unannotated
Scaffold_47	913818	Unannotated
Scaffold_47	1154129	L-type lectin-domain containing receptor kinase S.4 (LecRK-S.4) (EC 2.7.11.1)
Scaffold_47	1242097	Unannotated
Scaffold_48	231493	Unannotated
Scaffold_48	231782	Unannotated
Scaffold_48	276471	Unannotated
Scaffold_48	328776	Unannotated
Scaffold_48	383674	Unannotated
Scaffold_48	385344	Unannotated
Scaffold_48	385345	Elongation factor 2 (EF-2) (Protein LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1)
Scaffold_48	557206	Unannotated
Scaffold_48	899069	Unannotated
Scaffold_48	899070	Unannotated
Scaffold_48	899169	Ribosomal protein S2, mitochondrial
Scaffold_48	899170	Unannotated
Scaffold_48	899601	Unannotated
Scaffold_48	1562886	Unannotated
Scaffold_48	1729383	Unannotated
Scaffold_48	1825972	Unannotated
Scaffold_48	1859701	Unannotated
Scaffold_48	2010141	Unannotated
Scaffold_48	2012088	Unannotated
Scaffold_48	2018286	Unannotated
Scaffold_48	2018287	Unannotated
Scaffold_48	2260842	Unannotated
Scaffold_48	2357958	Unannotated
Scaffold_48	2358057	Unannotated
Scaffold_48	2358058	Unannotated
Scaffold_49	143544	Unannotated
Scaffold_49	430859	VIN3-like protein 1 (Protein VERNALIZATION 5)
Scaffold_49	555028	Unannotated
Scaffold_49	896905	Unannotated
Scaffold_49	1303364	Unannotated
Scaffold_49	1501318	Unannotated
Scaffold_49	1501319	Unannotated
Scaffold_49	1935598	Unannotated
Scaffold_49	2086659	Coronatine-insensitive protein 1 (COI-1) (F-box/LRR-repeat protein 2) (AtCOI1) (AtFBL2)
Scaffold_49	2205804	Cationic amino acid transporter 5
Scaffold_50	22742	Unannotated
Scaffold_50	22743	Unannotated
Scaffold_50	263943	Unannotated
Scaffold_50	316029	Unannotated
Scaffold_50	451558	Unannotated
Scaffold_50	881684	Unannotated
Scaffold_50	933156	Unannotated
Scaffold_50	1217038	Unannotated
Scaffold_50	1217039	Unannotated
Scaffold_50	1748893	Unannotated
Scaffold_50	1748897	Unannotated
Scaffold_51	382945	Unannotated
Scaffold_51	643922	Unannotated
Scaffold_51	891419	Unannotated
Scaffold_51	993657	Unannotated
Scaffold_51	1698681	Unannotated
Scaffold_51	1755454	Unannotated
Scaffold_52	63809	Protein NRT1/ PTR FAMILY 4.4 (AtNPF4.4) (Nitrate transporter 1.13)
Scaffold_52	64217	Protein NRT1/ PTR FAMILY 4.4 (AtNPF4.4) (Nitrate transporter 1.13)
Scaffold_52	139525	Probable beta-1,4-xylosyltransferase IRX10L (EC 2.4.2.-) (Glucuronoxylan glucuronosyltransferase 1) (AtGUT1) (Glucuronoxylan glucuronosyltransferase 2) (AtGUT2) (Protein IRREGULAR XYLEM 10-like) (Xylan xylosyltransferase IRX10L)
Scaffold_52	487845	Unannotated
Scaffold_52	508977	Unannotated
Scaffold_52	1151807	Unannotated
Scaffold_52	1187981	Unannotated
Scaffold_52	1304239	Unannotated
Scaffold_52	1304240	Unannotated
Scaffold_53	199181	Unannotated
Scaffold_53	1451949	Unannotated
Scaffold_53	1502358	Unannotated
Scaffold_53	1770683	Unannotated
Scaffold_54	550686	Unannotated
Scaffold_54	552825	Unannotated
Scaffold_54	952756	Unannotated
Scaffold_54	1165546	Unannotated
Scaffold_54	1298595	Probable serine/threonine-protein kinase PBL5 (EC 2.7.11.1) (PBS1-like protein 5) (Serine/threonine-protein kinase RLCKVII)
Scaffold_54	1298596	Unannotated
Scaffold_54	1298695	Unannotated
Scaffold_54	1538351	Unannotated
Scaffold_55	273374	Unannotated
Scaffold_55	333127	Unannotated
Scaffold_55	448276	Trafficking protein particle complex II-specific subunit 130 homolog (AtTRS130) (TRAPP II-specific subunit 130 homolog)
Scaffold_55	936391	Unannotated
Scaffold_55	1001444	tRNAse Z TRZ4, mitochondrial (EC 3.1.26.11) (Long tRNase Z 2) (tRNase ZL2) (AthTRZL2)
Scaffold_55	1002374	tRNAse Z TRZ4, mitochondrial (EC 3.1.26.11) (Long tRNase Z 2) (tRNase ZL2) (AthTRZL2)
Scaffold_55	1040823	tRNAse Z TRZ4, mitochondrial (EC 3.1.26.11) (Long tRNase Z 2) (tRNase ZL2) (AthTRZL2)
Scaffold_55	1229231	Unannotated
Scaffold_55	1476902	Unannotated
Scaffold_55	1479835	Unannotated
Scaffold_55	1499371	Unannotated
Scaffold_56	34251	Unannotated
Scaffold_56	210635	Unannotated
Scaffold_56	454251	Unannotated
Scaffold_56	561020	Unannotated
Scaffold_56	1267370	Unannotated
Scaffold_57	233376	Unannotated
Scaffold_57	752469	Unannotated
Scaffold_57	891358	Unannotated
Scaffold_57	978337	Unannotated
Scaffold_57	1302913	Unannotated
Scaffold_57	1389714	Unannotated
Scaffold_58	62179	Unannotated
Scaffold_58	248862	Unannotated
Scaffold_58	285919	Transcription termination factor MTERF9, chloroplastic (Mitochondrial transcription termination factor 9) (Protein TWIRT1)
Scaffold_58	450714	Unannotated
Scaffold_58	975871	Unannotated
Scaffold_58	1229375	Unannotated
Scaffold_58	1229378	Unannotated
Scaffold_58	1370494	Unannotated
Scaffold_59	349284	Unannotated
Scaffold_59	445130	Unannotated
Scaffold_59	469917	Unannotated
Scaffold_59	469918	Unannotated
Scaffold_59	470018	Unannotated
Scaffold_59	1196527	Asparagine synthetase, root [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase)
Scaffold_59	1251341	Asparagine synthetase, root [glutamine-hydrolyzing] (EC 6.3.5.4) (Glutamine-dependent asparagine synthetase)
Scaffold_60	186696	Unannotated
Scaffold_60	186822	Unannotated
Scaffold_60	186825	Unannotated
Scaffold_60	370641	Unannotated
Scaffold_60	370642	Unannotated
Scaffold_60	646675	Unannotated
Scaffold_60	844932	Protein CROWDED NUCLEI 4 (Protein LITTLE NUCLEI 4)
Scaffold_60	945208	Unannotated
Scaffold_60	1043541	Unannotated
Scaffold_60	1456078	Unannotated
Scaffold_61	15231	Unannotated
Scaffold_61	246748	Unannotated
Scaffold_61	246749	Unannotated
Scaffold_61	296963	Zinc finger protein BALDIBIS (ID1-like zinc finger protein 1) (Protein indeterminate-domain 9)
Scaffold_61	580904	Unannotated
Scaffold_61	1104273	Unannotated
Scaffold_61	1430675	Unannotated
Scaffold_61	1516818	Unannotated
Scaffold_62	592081	Unannotated
Scaffold_62	928220	Unannotated
Scaffold_62	1009937	Unannotated
Scaffold_62	1065429	Unannotated
Scaffold_62	1439241	Unannotated
Scaffold_62	1545369	Unannotated
Scaffold_63	177552	Unannotated
Scaffold_63	177553	Unannotated
Scaffold_63	1050311	Unannotated
Scaffold_63	1122256	Granule-bound starch synthase 2, chloroplastic/amyloplastic (EC 2.4.1.21) (Granule-bound starch synthase II) (GBSS-II) (SS II)
Scaffold_63	1261652	Unannotated
Scaffold_63	1462081	Unannotated
Scaffold_63	1515994	Unannotated
Scaffold_63	1536354	Unannotated
Scaffold_64	191152	Unannotated
Scaffold_64	516734	Unannotated
Scaffold_64	516735	Unannotated
Scaffold_64	516835	Unannotated
Scaffold_64	819359	Unannotated
Scaffold_64	1144897	Unannotated
Scaffold_65	24907	Unannotated
Scaffold_65	36620	Protein CHROMATIN REMODELING 4 (AtCHR4) (EC 3.6.4.-) (Protein PICKLE RELATED 1)
Scaffold_65	176093	Unannotated
Scaffold_65	176095	Unannotated
Scaffold_65	176096	Unannotated
Scaffold_65	558197	Unannotated
Scaffold_65	558198	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 5) (AtTPS5)
Scaffold_65	736432	Unannotated
Scaffold_65	736433	Unannotated
Scaffold_65	1034735	Unannotated
Scaffold_65	1034835	Unannotated
Scaffold_65	1034836	Unannotated
Scaffold_66	197998	Unannotated
Scaffold_66	197999	Unannotated
Scaffold_66	247704	Unannotated
Scaffold_66	605464	Unannotated
Scaffold_66	614704	Unannotated
Scaffold_66	715608	Unannotated
Scaffold_66	876045	Unannotated
Scaffold_66	1274160	Unannotated
Scaffold_66	1286523	Unannotated
Scaffold_66	1323928	Unannotated
Scaffold_66	1324029	Unannotated
Scaffold_66	1324030	Unannotated
Scaffold_67	219926	Unannotated
Scaffold_67	641829	Unannotated
Scaffold_67	1001339	Unannotated
Scaffold_67	1001438	Unannotated
Scaffold_67	1001439	Unannotated
Scaffold_67	1079606	Unannotated
Scaffold_67	1376528	Unannotated
Scaffold_68	431114	Unannotated
Scaffold_68	573482	Unannotated
Scaffold_68	573483	Unannotated
Scaffold_68	689362	Unannotated
Scaffold_68	689461	Unannotated
Scaffold_68	747381	Unannotated
Scaffold_68	1030925	Unannotated
Scaffold_69	380491	Unannotated
Scaffold_69	571550	Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic nucleotide- and calmodulin-regulated ion channel 1)
Scaffold_69	694004	Unannotated
Scaffold_69	704375	Unannotated
Scaffold_69	1107640	Protein NETWORKED 1D
Scaffold_69	1136186	Protein NETWORKED 1D
Scaffold_69	1200851	30S ribosomal protein S9, mitochondrial
Scaffold_70	65852	Transcription factor AS1 (Myb-related protein 91) (AtMYB91) (Protein ASYMMETRIC LEAVES 1) (Protein PHANTASTICA) (AtPHAN)
Scaffold_70	72792	Unannotated
Scaffold_70	72793	Unannotated
Scaffold_70	224681	Inducible nitrate reductase [NADH] 2 (NR) (EC 1.7.1.1)
Scaffold_70	334721	Unannotated
Scaffold_70	535440	Unannotated
Scaffold_70	1118569	Unannotated
Scaffold_71	59042	Unannotated
Scaffold_71	692733	Unannotated
Scaffold_71	857637	Unannotated
Scaffold_71	1116248	Unannotated
Scaffold_72	331664	Unannotated
Scaffold_72	361708	Unannotated
Scaffold_72	443769	Unannotated
Scaffold_72	562736	Unannotated
Scaffold_72	563162	Unannotated
Scaffold_72	563741	Unannotated
Scaffold_72	563743	Pentatricopeptide repeat-containing protein At2g02980, chloroplastic (Protein ORGANELLE TRANSCRIPT PROCESSING 85)
Scaffold_72	874099	Receptor-like serine/threonine-protein kinase ALE2 (EC 2.7.11.1) (Protein ABNORMAL LEAF SHAPE 2)
Scaffold_72	874199	Unannotated
Scaffold_72	934638	Unannotated
Scaffold_73	523870	Unannotated
Scaffold_73	681192	Unannotated
Scaffold_73	854612	Unannotated
Scaffold_73	854713	Unannotated
Scaffold_73	1146930	Unannotated
Scaffold_74	224575	Unannotated
Scaffold_74	453018	Unannotated
Scaffold_74	513070	tRNA-splicing endonuclease subunit Sen2-2 (EC 4.6.1.16) (tRNA-intron endonuclease Sen2-2) (AtSen2)
Scaffold_74	783000	Unannotated
Scaffold_74	783001	Unannotated
Scaffold_76	88649	Unannotated
Scaffold_76	185550	Unannotated
Scaffold_76	185650	TMV resistance protein N
Scaffold_76	209197	SWI/SNF complex subunit SWI3D (AtSWI3D) (Transcription regulatory protein SWI3D)
Scaffold_77	11285	Probable protein phosphatase 2C 73 (AtPP2C73) (EC 3.1.3.16) (AtPPC6;7)
Scaffold_77	82995	Unannotated
Scaffold_77	83744	Unannotated
Scaffold_78	18237	Unannotated
Scaffold_80	65263	Unannotated
Scaffold_80	65436	Unannotated
Scaffold_83	140153	Unannotated
Scaffold_84	191527	ENHANCER OF AG-4 protein 2 (Protein AERIAL ROSETTE 1)
Scaffold_85	3750	Unannotated
Scaffold_85	10348	Unannotated
Scaffold_85	58752	Unannotated
Scaffold_86	246360	DNA-directed RNA polymerase D subunit 2b (AtNRPD2b) (Nuclear RNA polymerase D 2b) (EC 2.7.7.6) (RNA polymerase IV subunit 2b) (POL IV 2b)
Scaffold_87	200271	Unannotated
Scaffold_87	200272	Unannotated
Scaffold_88	201547	Unannotated
Scaffold_88	233873	Unannotated
Scaffold_89	10626	Unannotated
Scaffold_89	213703	Unannotated
Scaffold_89	238133	Unannotated
Scaffold_90	33303	ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit)
Scaffold_90	168881	Unannotated
Scaffold_91	19749	Unannotated
Scaffold_91	63708	Pre-mRNA-processing protein 40A (Mediator of RNA polymerase II transcription subunit 35a)
Scaffold_91	88551	Unannotated
Scaffold_91	88682	Unannotated
Scaffold_91	326510	Unannotated
Scaffold_91	348297	Unannotated
Scaffold_94	143349	Receptor-like kinase TMK3 (EC 2.7.11.1) (BARK1-like kinase 2) (Leucine-rich repeat receptor-like kinases TMK3) (Transmembrane kinase 3)
Scaffold_94	143350	Unannotated
Scaffold_94	163181	Unannotated
Scaffold_94	351268	Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (EC 2.7.11.1) (Protein BARELY ANY MERISTEM 3)
Scaffold_95	20096	Unannotated
Scaffold_95	123366	Unannotated
Scaffold_96	276137	Unannotated
Scaffold_97	67589	Unannotated
Scaffold_97	67590	Unannotated
Scaffold_97	159555	Unannotated
Scaffold_98	362732	Probable LRR receptor-like serine/threonine-protein kinase At4g36180 (EC 2.7.11.1)
Scaffold_99	24765	Unannotated
Scaffold_100	47861	Unannotated
Scaffold_100	194665	Unannotated
Scaffold_100	273514	Unannotated
Scaffold_100	430303	Unannotated
Scaffold_101	49594	Unannotated
Scaffold_101	367170	Unannotated
Scaffold_102	2467	Unannotated
Scaffold_102	266973	Unannotated
Scaffold_102	267276	Unannotated
Scaffold_102	267277	Unannotated
Scaffold_102	402519	Uncharacterized protein At5g39865
Scaffold_104	33685	Unannotated
Scaffold_104	123066	Zinc-finger homeodomain protein 9 (AtZHD9) (Homeobox protein 34) (AtHB-34)
Scaffold_104	126562	Purple acid phosphatase 8 (EC 3.1.3.2)
Scaffold_104	178800	Unannotated
Scaffold_105	61088	Unannotated
Scaffold_105	61089	Unannotated
Scaffold_105	61853	Unannotated
Scaffold_105	464797	Unannotated
Scaffold_106	55881	Unannotated
Scaffold_106	169367	Protein NBR1 homolog (AtNBR1) (At4g24690)
Scaffold_106	267532	Unannotated
Scaffold_106	389776	Unannotated
Scaffold_106	392092	Stromal 70 kDa heat shock-related protein, chloroplastic
Scaffold_107	285797	Stromal 70 kDa heat shock-related protein, chloroplastic
Scaffold_108	34583	Stromal 70 kDa heat shock-related protein, chloroplastic
Scaffold_108	239420	Probable apyrase 7 (AtAPY7) (EC 3.6.1.5) (ATP-diphosphatase) (ATP-diphosphohydrolase) (Adenosine diphosphatase) (ADPase) (NTPDase) (Nucleoside triphosphate diphosphohydrolase 7)
Scaffold_109	18600	Unannotated
Scaffold_109	114368	Probable serine/threonine-protein kinase PIX7 (EC 2.7.11.1)
Scaffold_109	242081	Unannotated
Scaffold_109	423587	Unannotated
Scaffold_110	111224	Unannotated
Scaffold_110	433837	Unannotated
Scaffold_111	281364	COMPASS-like H3K4 histone methylase component WDR5A (AtWDR5A)
Scaffold_111	290956	Unannotated
Scaffold_111	291299	Unannotated
Scaffold_112	108876	Unannotated
Scaffold_112	109054	Unannotated
Scaffold_112	277321	Probable xyloglucan endotransglucosylase/hydrolase protein 23 (At-XTH23) (XTH-23) (EC 2.4.1.207)
Scaffold_112	394580	Unannotated
Scaffold_112	396735	Unannotated
Scaffold_113	358180	Unannotated
Scaffold_113	388735	Serine decarboxylase (AtSDC) (EC 4.1.1.-) (Protein EMBRYO DEFECTIVE 1075) (Serine decarboxylase 1) (AtSDC1)
Scaffold_114	38370	Unannotated
Scaffold_114	38371	Unannotated
Scaffold_114	164520	Unannotated
Scaffold_114	377309	Unannotated
Scaffold_114	377408	Squalene epoxidase 2, mitochondrial (AtSQE2) (EC 1.14.14.17)
Scaffold_114	377409	Unannotated
Scaffold_115	168986	Unannotated
Scaffold_117	32268	Unannotated
Scaffold_117	36961	Unannotated
Scaffold_117	98044	Unannotated
Scaffold_117	215841	Unannotated
Scaffold_118	38886	Unannotated
Scaffold_118	148201	Unannotated
Scaffold_118	222274	Unannotated
Scaffold_119	116731	Unannotated
Scaffold_121	38462	Unannotated
Scaffold_122	149691	Unannotated
Scaffold_122	323090	Unannotated
Scaffold_123	464978	Unannotated
Scaffold_123	464980	Unannotated
Scaffold_123	469331	Unannotated
Scaffold_124	293454	Unannotated
Scaffold_125	77230	Unannotated
Scaffold_125	79171	Unannotated
Scaffold_125	197923	Unannotated
Scaffold_125	197924	GDP-L-galactose phosphorylase 1 (EC 2.7.7.69) (Protein VITAMIN C DEFECTIVE 2)
Scaffold_126	60641	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic (EC 2.1.1.14) (Cobalamin-independent methionine synthase 3) (AtMS3)
Scaffold_127	12154	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3, chloroplastic (EC 2.1.1.14) (Cobalamin-independent methionine synthase 3) (AtMS3)
Scaffold_127	12253	Unannotated
Scaffold_127	12254	Unannotated
Scaffold_127	463851	Unannotated
Scaffold_128	164827	Unannotated
Scaffold_128	256181	Unannotated
Scaffold_128	271123	Unannotated
Scaffold_128	274545	Unannotated
Scaffold_129	59793	Unannotated
Scaffold_129	60212	Unannotated
Scaffold_129	60213	Unannotated
Scaffold_129	73390	Unannotated
Scaffold_129	198958	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (AtBAK1) (BRI1-associated receptor kinase 1) (EC 2.7.10.1) (EC 2.7.11.1) (Protein ELONGATED) (Somatic embryogenesis receptor kinase 3) (AtSERK3) (Somatic embryogenesis receptor-like kinase 3)
Scaffold_129	198959	Unannotated
Scaffold_130	96729	Unannotated
Scaffold_130	99087	Unannotated
Scaffold_131	59932	Unannotated
Scaffold_131	403314	Unannotated
Scaffold_131	568970	Unannotated
Scaffold_132	354505	Unannotated
Scaffold_133	48419	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A)
Scaffold_133	48420	Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (EC 1.2.1.13) (NADP-dependent glyceraldehydephosphate dehydrogenase subunit A)
Scaffold_133	162478	Unannotated
Scaffold_134	21565	Unannotated
Scaffold_134	243260	Unannotated
Scaffold_134	319829	Chromatin modification-related protein EAF1 B (ESA1-associated factor 1 B)
Scaffold_134	392366	Unannotated
Scaffold_134	392914	Unannotated
Scaffold_135	9927	Unannotated
Scaffold_135	9928	Unannotated
Scaffold_136	87840	Unannotated
Scaffold_136	201507	Unannotated
Scaffold_138	240058	Unannotated
Scaffold_138	255805	Sulfite reductase [ferredoxin], chloroplastic (GmSiR) (EC 1.8.7.1) (Nucleoid DNA-compacting protein of 68 kDa) (Fragment)
Scaffold_140	7324	Glutamate decarboxylase 1 (GAD 1) (EC 4.1.1.15)
Scaffold_140	40519	Unannotated
Scaffold_140	75462	Pentatricopeptide repeat-containing protein At5g39710 (Protein EMBRYO DEFECTIVE 2745)
Scaffold_140	98991	Pentatricopeptide repeat-containing protein At5g39710 (Protein EMBRYO DEFECTIVE 2745)
Scaffold_140	98992	Unannotated
Scaffold_140	318327	Unannotated
Scaffold_140	455869	Unannotated
Scaffold_140	455968	Unannotated
Scaffold_140	517832	Unannotated
Scaffold_140	546482	Unannotated
Scaffold_141	302409	Unannotated
Scaffold_141	418058	T-complex protein 1 subunit gamma (TCP-1-gamma) (CCT-gamma) (Chaperonin CCT3)
Scaffold_141	532158	T-complex protein 1 subunit gamma (TCP-1-gamma) (CCT-gamma) (Chaperonin CCT3)
Scaffold_141	532159	Unannotated
Scaffold_143	125358	Unannotated
Scaffold_143	391458	Unannotated
Scaffold_143	421349	F-box/LRR-repeat protein At4g29420
Scaffold_143	495659	Unannotated
Scaffold_143	495698	Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase)
Scaffold_144	82631	Unannotated
Scaffold_144	447145	Unannotated
Scaffold_145	406598	Unannotated
Scaffold_146	1203	Unannotated
Scaffold_146	147606	Unannotated
Scaffold_146	147607	Unannotated
Scaffold_146	190574	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_146	198799	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_146	199901	Probable receptor-like protein kinase At1g11050 (EC 2.7.11.1)
Scaffold_146	214330	Glucosamine inositolphosphorylceramide transferase 1 (EC 2.4.99.-) (Glycosyltransferase family protein 64 protein C5) (GT64 C5)
Scaffold_146	326014	Chloroplast envelope membrane 70 kDa heat shock-related protein
Scaffold_146	377266	1-aminocyclopropane-1-carboxylate synthase (ACC synthase) (EC 4.4.1.14) (S-adenosyl-L-methionine methylthioadenosine-lyase)
Scaffold_147	181964	Ethylene-responsive transcription factor RAP2-2 (AtRAP2.2) (Protein RELATED TO APETALA2 2)
Scaffold_147	227474	Ethylene-responsive transcription factor RAP2-2 (AtRAP2.2) (Protein RELATED TO APETALA2 2)
Scaffold_147	228301	Unannotated
Scaffold_147	580013	Serine hydroxymethyltransferase 2, mitochondrial (SHMT2) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 2) (Serine methylase 2)
Scaffold_147	580112	Serine hydroxymethyltransferase 2, mitochondrial (SHMT2) (EC 2.1.2.1) (Glycine hydroxymethyltransferase 2) (Serine methylase 2)
Scaffold_149	52706	Unannotated
Scaffold_149	267378	Unannotated
Scaffold_149	288665	Unannotated
Scaffold_149	288666	Unannotated
Scaffold_149	454069	Unannotated
Scaffold_150	31017	Unannotated
Scaffold_150	254301	Unannotated
Scaffold_150	262104	Unannotated
Scaffold_150	279048	Unannotated
Scaffold_150	524938	Protein EXECUTER 2, chloroplastic (OsEX2)
Scaffold_150	559611	Unannotated
Scaffold_150	559614	Unannotated
Scaffold_150	687945	Unannotated
Scaffold_151	248846	Unannotated
Scaffold_151	376657	Unannotated
Scaffold_152	155811	Unannotated
Scaffold_152	205543	Unannotated
Scaffold_152	205643	Unannotated
Scaffold_152	238720	Unannotated
Scaffold_152	352706	Unannotated
Scaffold_152	489454	Unannotated
Scaffold_152	537889	Unannotated
Scaffold_152	623560	Unannotated
Scaffold_153	440449	Unannotated
Scaffold_154	30910	Pentatricopeptide repeat-containing protein At2g01860 (Protein EMBRYO DEFECTIVE 975)
Scaffold_155	167613	Pentatricopeptide repeat-containing protein At2g01860 (Protein EMBRYO DEFECTIVE 975)
Scaffold_156	55196	Unannotated
Scaffold_156	173782	Unannotated
Scaffold_156	174049	Unannotated
Scaffold_156	175060	Unannotated
Scaffold_156	199858	Unannotated
Scaffold_156	200138	Unannotated
Scaffold_156	234199	Unannotated
Scaffold_157	11014	Unannotated
Scaffold_157	84590	Transcription factor MYC2 (AtMYC2) (Basic helix-loop-helix protein 6) (AtbHLH6) (bHLH 6) (Protein JASMONATE INSENSITIVE 1) (R-homologous Arabidopsis protein 1) (RAP-1) (Transcription factor EN 38) (Z-box binding factor 1 protein) (bHLH transcription facto
Scaffold_159	220446	Unannotated
Scaffold_161	231904	Unannotated
Scaffold_162	348011	Unannotated
Scaffold_163	41527	General transcription and DNA repair factor IIH helicase subunit XPB1 (TFIIH subunit XPB) (EC 3.6.4.12) (ERCC3 homolog 1) (Protein araXPB) (RAD25 homolog 1) (AtXPB1) (XPB homolog 1)
Scaffold_163	188258	General transcription and DNA repair factor IIH helicase subunit XPB1 (TFIIH subunit XPB) (EC 3.6.4.12) (ERCC3 homolog 1) (Protein araXPB) (RAD25 homolog 1) (AtXPB1) (XPB homolog 1)
Scaffold_164	63407	Unannotated
Scaffold_164	63408	Unannotated
Scaffold_164	90749	Unannotated
Scaffold_164	316311	Unannotated
Scaffold_164	536795	Disease resistance protein RML1A (Protein RESISTANCE TO LEPTOSPHAERIA MACULANS 1A)
Scaffold_165	43783	Unannotated
Scaffold_165	51771	Unannotated
Scaffold_165	51871	Unannotated
Scaffold_165	251813	Unannotated
Scaffold_165	405913	Unannotated
Scaffold_165	405914	E3 ubiquitin-protein ligase UPL3 (Ubiquitin-protein ligase 3) (EC 2.3.2.26) (HECT ubiquitin-protein ligase 3) (HECT-type E3 ubiquitin transferase UPL3) (Protein KAKTUS)
Scaffold_165	422487	Unannotated
Scaffold_165	437267	Unannotated
Scaffold_165	495163	Unannotated
Scaffold_166	149450	Unannotated
Scaffold_167	32784	Unannotated
Scaffold_167	671441	Unannotated
Scaffold_168	429779	Unannotated
Scaffold_169	49096	Unannotated
Scaffold_169	171175	Nuclear transcription factor Y subunit B (NF-YB) (CAAT box DNA-binding protein subunit B)
Scaffold_169	171176	Unannotated
Scaffold_169	489907	Unannotated
Scaffold_169	623956	Unannotated
Scaffold_169	626533	Unannotated
Scaffold_170	61358	Unannotated
Scaffold_170	333105	Unannotated
Scaffold_170	403737	Pentatricopeptide repeat-containing protein At5g65560
Scaffold_171	226610	Unannotated
Scaffold_171	553079	Unannotated
Scaffold_171	661060	Unannotated
Scaffold_171	661061	Unannotated
Scaffold_172	180810	Unannotated
Scaffold_172	282154	Unannotated
Scaffold_172	559069	Unannotated
Scaffold_172	633729	Unannotated
Scaffold_172	684454	Unannotated
Scaffold_172	684553	Unannotated
Scaffold_173	18909	Unannotated
Scaffold_173	427849	Unannotated
Scaffold_173	442669	Unannotated
Scaffold_173	565534	Unannotated
Scaffold_174	357805	Unannotated
Scaffold_175	462129	Unannotated
Scaffold_175	511452	Unannotated
Scaffold_175	632401	Unannotated
Scaffold_175	733093	Chaperone protein ClpB3, chloroplastic (ATP-dependent Clp protease ATP-binding subunit ClpB homolog 3) (Casein lytic proteinase B3) (Protein ALBINO OR PALE GREEN 6)
Scaffold_175	733102	Unannotated
Scaffold_176	70910	Unannotated
Scaffold_176	118503	Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Calcium-dependent protein kinase isoform 2) (OsCDPK2) (OsCPK2)
Scaffold_176	172293	Unannotated
Scaffold_176	590350	Unannotated
Scaffold_177	331993	Unannotated
Scaffold_177	331998	Unannotated
Scaffold_177	412077	Unannotated
Scaffold_178	752177	Unannotated
Scaffold_179	386049	Unannotated
Scaffold_179	454051	Unannotated
Scaffold_180	363556	Unannotated
Scaffold_180	498105	Unannotated
Scaffold_180	498294	Unannotated
Scaffold_180	498295	Unannotated
Scaffold_180	498394	Unannotated
Scaffold_180	498845	Unannotated
Scaffold_180	514346	Unannotated
Scaffold_181	481087	Unannotated
Scaffold_181	481088	Unannotated
Scaffold_181	584537	Unannotated
Scaffold_181	677065	Unannotated
Scaffold_181	677066	Unannotated
Scaffold_181	677166	Unannotated
Scaffold_181	691826	Unannotated
Scaffold_181	718364	Notchless protein homolog
Scaffold_181	849701	Probable isoaspartyl peptidase/L-asparaginase 2 (EC 3.4.19.5) (L-asparagine amidohydrolase 2) [Cleaved into: Isoaspartyl peptidase/L-asparaginase 2 subunit alpha; Isoaspartyl peptidase/L-asparaginase 2 subunit beta]
Scaffold_182	7234	Probable isoaspartyl peptidase/L-asparaginase 2 (EC 3.4.19.5) (L-asparagine amidohydrolase 2) [Cleaved into: Isoaspartyl peptidase/L-asparaginase 2 subunit alpha; Isoaspartyl peptidase/L-asparaginase 2 subunit beta]
Scaffold_182	7235	Unannotated
Scaffold_188	27218	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_192	33799	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_192	73410	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_196	11773	Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1)
Scaffold_208	30225	Unannotated
Scaffold_211	33760	DNA-directed RNA polymerase II subunit 2 (DNA-directed RNA polymerase II 135 kDa polypeptide) (DNA-directed RNA polymerase II subunit RPB2) (RNA polymerase II subunit 2) (RNA polymerase II subunit B2) (EC 2.7.7.6) (Protein EMBRYO DEFECTIVE 1989)
Scaffold_214	1839	Unannotated
Scaffold_214	1939	Unannotated
Scaffold_236	51277	Fatty acid hydroperoxide lyase, chloroplastic (LeHPL) (EC 4.2.99.-) (Cytochrome P450 74B)
Scaffold_237	12352	Unannotated
Scaffold_237	12353	Unannotated
Scaffold_241	6186	GDSL esterase/lipase CPRD49 (EC 3.1.1.-) (Extracellular lipase CPRD49)
Scaffold_241	6187	Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13)
Scaffold_243	15490	Unannotated
Scaffold_249	10673	Unannotated
Scaffold_264	1604	Unannotated
Scaffold_264	79488	Unannotated
Scaffold_266	44972	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
Scaffold_269	15417	ABC transporter B family member 1 (ABC transporter ABCB.1) (AtABCB1) (Multidrug resistance protein 1) (P-glycoprotein 1) (AtPgp1)
Scaffold_269	15418	Pentatricopeptide repeat-containing protein At1g30610, chloroplastic (Protein EMBRYO DEFECTIVE 2279)
Scaffold_285	7930	Pentatricopeptide repeat-containing protein At1g30610, chloroplastic (Protein EMBRYO DEFECTIVE 2279)
Scaffold_289	48697	Unannotated
Scaffold_289	48798	Unannotated
Scaffold_289	48799	Unannotated
Scaffold_290	82538	Unannotated
Scaffold_290	82539	Putative alpha-L-fucosidase 1 (EC 3.2.1.51) (Alpha-L-fucoside fucohydrolase)
Scaffold_291	53849	Unannotated
Scaffold_292	10612	Unannotated
Scaffold_292	15045	Subtilisin-like protease Glyma18g48580 (EC 3.4.21.-) [Cleaved into: Subtilase peptide GmSubPep (Glycine max subtilase peptide) (GmSubPep)]
Scaffold_294	27563	Scarecrow-like protein 3 (AtSCL3) (GRAS family protein 5) (AtGRAS-5)
Scaffold_306	66246	Scarecrow-like protein 3 (AtSCL3) (GRAS family protein 5) (AtGRAS-5)
Scaffold_306	66247	Scarecrow-like protein 3 (AtSCL3) (GRAS family protein 5) (AtGRAS-5)
Scaffold_309	81717	Unannotated
Scaffold_319	56707	Unannotated
Scaffold_319	58659	Unannotated
Scaffold_320	14646	Unannotated
Scaffold_327	44564	Unannotated
Scaffold_327	50556	Unannotated
Scaffold_329	45252	Unannotated
Scaffold_329	66409	Unannotated
Scaffold_336	56370	Unannotated
Scaffold_364	64523	50S ribosomal protein L27, chloroplastic (CL27)
Scaffold_370	4864	Unannotated
Scaffold_400	42990	Probable inactive histone-lysine N-methyltransferase SUVR2 (Protein SET DOMAIN GROUP 18) (Suppressor of variegation 3-9-related protein 2) (Su(var)3-9-related protein 2)
Scaffold_405	44288	Unannotated
Scaffold_412	9152	Unannotated
Scaffold_414	56065	Unannotated
Scaffold_427	6282	Putative calcium-transporting ATPase 11, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-ATPase isoform 11)
Scaffold_427	49902	Unannotated
Scaffold_427	50029	Unannotated
Scaffold_427	50806	Zinc finger protein ZAT4
Scaffold_450	35216	Unannotated
Scaffold_464	9028	Unannotated
Scaffold_471	52558	Unannotated
Scaffold_477	8471	Unannotated
Scaffold_492	30509	Unannotated
Scaffold_492	30510	Ubiquitin-activating enzyme E1 1 (AtUBA1) (EC 6.2.1.45) (Protein MODIFIER OF SNC1 5)
Scaffold_492	44782	Ubiquitin-activating enzyme E1 1 (AtUBA1) (EC 6.2.1.45) (Protein MODIFIER OF SNC1 5)
Scaffold_494	49714	Ubiquitin-activating enzyme E1 1 (AtUBA1) (EC 6.2.1.45) (Protein MODIFIER OF SNC1 5)
Scaffold_495	51517	Unannotated
Scaffold_496	2005	Unannotated
Scaffold_496	2006	Unannotated
Scaffold_496	26414	Unannotated
Scaffold_512	47967	Unannotated
Scaffold_513	21400	Unannotated
Scaffold_523	28467	Unannotated
Scaffold_535	47115	UV-B-induced protein At3g17800, chloroplastic
Scaffold_537	6293	Unannotated
Scaffold_537	31834	Unannotated
Scaffold_538	31494	Unannotated
Scaffold_541	2574	Unannotated
Scaffold_566	937	Unannotated
Scaffold_576	8094	Unannotated
Scaffold_581	40367	Calcium-transporting ATPase 4, plasma membrane-type (EC 7.2.2.10) (Ca(2+)-ATPase isoform 4)
Scaffold_581	40468	Unannotated
Scaffold_586	70523	Unannotated
Scaffold_590	42737	Protein CHAPERONE-LIKE PROTEIN OF POR1, chloroplastic (AtCPP1) (Protein CELL GROWTH DEFECT FACTOR 1) (AtCDF1)
Scaffold_591	20109	Unannotated
Scaffold_603	66438	Unannotated
Scaffold_623	31346	Unannotated
Scaffold_626	8976	Unannotated
Scaffold_626	9050	Unannotated
Scaffold_627	42370	Unannotated
Scaffold_633	19128	Unannotated
Scaffold_634	61422	Unannotated
Scaffold_636	59730	Unannotated
Scaffold_649	19030	Unannotated
Scaffold_649	19130	Unannotated
Scaffold_651	66673	Unannotated
Scaffold_657	5980	Unannotated
Scaffold_657	5981	Unannotated
Scaffold_657	6080	Unannotated
Scaffold_657	6081	Unannotated
Scaffold_662	68149	Cleavage and polyadenylation specificity factor subunit 3-II (EC 3.1.27.-) (Cleavage and polyadenylation specificity factor 73 kDa subunit II) (AtCPSF73-II) (CPSF 73 kDa subunit II) (Protein EMBRYO SAC DEVELOPMENT ARREST 26)
Scaffold_663	41125	Unannotated
Scaffold_664	20309	Unannotated
Scaffold_673	57176	Unannotated
Scaffold_675	25772	Unannotated
Scaffold_675	56492	Unannotated
Scaffold_679	44844	Unannotated
Scaffold_699	65643	Unannotated
Scaffold_701	47001	Long chain acyl-CoA synthetase 9, chloroplastic (EC 6.2.1.3)
Scaffold_709	40151	Unannotated
Scaffold_709	40152	Unannotated
Scaffold_712	58542	Unannotated
Scaffold_728	46627	Unannotated
Scaffold_728	46726	Unannotated
Scaffold_739	18277	Unannotated
Scaffold_739	43444	Unannotated
Scaffold_744	11602	Unannotated
Scaffold_753	63657	Cleavage and polyadenylation specificity factor subunit 3-I (EC 3.1.27.-) (Cleavage and polyadenylation specificity factor 73 kDa subunit I) (AtCPSF73-I) (CPSF 73 kDa subunit I)
Scaffold_753	64783	Cleavage and polyadenylation specificity factor subunit 3-I (EC 3.1.27.-) (Cleavage and polyadenylation specificity factor 73 kDa subunit I) (AtCPSF73-I) (CPSF 73 kDa subunit I)
Scaffold_760	11704	Unannotated
Scaffold_764	57597	CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 3) (Calmodulin-binding protein kinase 3) (AtCBK3) (CaM-binding protein kinase 3)
Scaffold_767	7119	CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 3) (Calmodulin-binding protein kinase 3) (AtCBK3) (CaM-binding protein kinase 3)
Scaffold_767	21814	tRNA(adenine(34)) deaminase, chloroplastic (TADA) (EC 3.5.4.33) (tRNA adenosine deaminase arginine) (tRNA arginine adenosine deaminase)
Scaffold_788	62770	Unannotated
Scaffold_798	63668	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 1) (AtTPS1)
Scaffold_804	40132	Unannotated
Scaffold_853	28524	Protein NRT1/ PTR FAMILY 5.4 (AtNPF5.4)
Scaffold_861	1159	Unannotated
Scaffold_861	55911	Unannotated
Scaffold_862	35273	Unannotated
Scaffold_865	60828	Unannotated
Scaffold_866	58759	Unannotated
Scaffold_868	27266	Unannotated
Scaffold_868	27739	Unannotated
Scaffold_877	3291	Unannotated
Scaffold_878	52533	Unannotated
Scaffold_887	60473	Unannotated
Scaffold_887	60474	Unannotated
Scaffold_894	61077	Unannotated
Scaffold_901	54611	Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 11) (AtTPS11)
Scaffold_901	54612	Cellulose synthase-like protein D3 (AtCslD3) (EC 2.4.1.-) (Protein KOJAK)
Scaffold_914	20874	Cellulose synthase-like protein D3 (AtCslD3) (EC 2.4.1.-) (Protein KOJAK)
Scaffold_937	16786	Unannotated
Scaffold_962	377	Unannotated
Scaffold_962	32973	Transcription factor DIVARICATA
Scaffold_965	58012	Transcription factor DIVARICATA
Scaffold_967	33095	Unannotated
Scaffold_974	49047	Unannotated
Scaffold_990	6158	Unannotated
Scaffold_990	6390	Fasciclin-like arabinogalactan protein 2
Scaffold_1009	54845	Unannotated
Scaffold_1009	54846	Unannotated
Scaffold_1010	17255	Unannotated
Scaffold_1013	54584	Unannotated
Scaffold_1013	55732	Unannotated
Scaffold_1028	48543	ATP sulfurylase 2 (EC 2.7.7.4)
Scaffold_1028	48545	Unannotated
Scaffold_1047	9112	Unannotated
Scaffold_1060	32153	Unannotated
Scaffold_1066	38009	Unannotated
Scaffold_1066	38108	Unannotated
Scaffold_1077	54191	Unannotated
Scaffold_1080	6115	Unannotated
Scaffold_1085	8969	Unannotated
Scaffold_1124	50148	Unannotated
Scaffold_1124	50149	Probable carboxylesterase 17 (AtCXE17) (EC 3.1.1.1)
Scaffold_1135	24722	Unannotated
Scaffold_1182	39098	Unannotated
Scaffold_1182	48770	Unannotated
Scaffold_1182	48771	Urea-proton symporter DUR3 (AtDUR3) (High-affinity urea active transporter DUR3)
Scaffold_1194	15085	Unannotated
Scaffold_1210	6919	Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7) (eIF-3-zeta) (p66)
Scaffold_1210	6920	Unannotated
Scaffold_1229	52609	Unannotated
Scaffold_1264	9310	Unannotated
Scaffold_1269	49728	Sphingoid long-chain bases kinase 1 (AtLCBK1) (LCB kinase 1) (EC 2.7.-.-) (Sphingosine kinase 1)
Scaffold_1273	2727	Unannotated
Scaffold_1274	8321	Unannotated
Scaffold_1281	18107	Subtilisin-like protease SBT3.9 (EC 3.4.21.-) (Subtilase subfamily 3 member 9) (AtSBT3.9)
Scaffold_1300	8697	Unannotated
Scaffold_1302	2660	Unannotated
Scaffold_1315	28889	Unannotated
Scaffold_1328	28880	Unannotated
Scaffold_1328	28881	Unannotated
Scaffold_1351	34257	Unannotated
Scaffold_1356	29505	Protein phosphatase 1 regulatory subunit INH3 (Protein INHIBITOR-3) (AtINH3)
Scaffold_1361	17569	Glutathione S-transferase T2 (AtGSTT2) (EC 2.5.1.18) (GST class-theta member 2) (Glutathione S-transferase 10B)
Scaffold_1387	7794	Unannotated
Scaffold_1387	7795	Unannotated
Scaffold_1391	14916	Unannotated
Scaffold_1412	1141	Unannotated
Scaffold_1431	48845	Unannotated
Scaffold_1461	33540	Potassium channel AKT6 (Potassium channel SPIK) (Shaker pollen inward rectifier K(+) channel)
Scaffold_1503	45742	Unannotated
Scaffold_1507	30415	Unannotated
Scaffold_1507	30417	Unannotated
Scaffold_1514	27566	Unannotated
Scaffold_1514	27567	Unannotated
Scaffold_1539	5675	Unannotated
Scaffold_1597	31409	Unannotated
Scaffold_1644	15656	Unannotated
Scaffold_1675	13833	Unannotated
Scaffold_1675	13834	Unannotated
Scaffold_1684	5267	Unannotated
Scaffold_1693	43127	Unannotated
Scaffold_1698	40609	Unannotated
Scaffold_1772	29842	Protease Do-like 1, chloroplastic (EC 3.4.21.-) (Protein DEGRADATION OF PERIPLASMIC PROTEINS 1) (DEGP PROTEASE 1)
Scaffold_1779	4469	Unannotated
Scaffold_1788	7011	Unannotated
Scaffold_1798	18677	Unannotated
Scaffold_1821	28815	Unannotated
Scaffold_1827	7013	Unannotated
Scaffold_1840	38599	Unannotated
Scaffold_1900	18017	40S ribosomal protein S4
Scaffold_1902	2226	Unannotated
Scaffold_1928	11932	Unannotated
Scaffold_2005	14119	Unannotated
Scaffold_2009	40377	Unannotated
Scaffold_2397	98668	Unannotated
Scaffold_2398	1118	Unannotated
Scaffold_2398	1269	Chlorophyll a-b binding protein CP29.2, chloroplastic (LHCB4.2) (LHCII protein 4.2)
Scaffold_2400	18356	Unannotated
Scaffold_2400	19291	Unannotated
Scaffold_2400	19292	Unannotated
Scaffold_2400	72232	Unannotated
Scaffold_2400	72233	Unannotated
Scaffold_2401	57611	Unannotated
Scaffold_2401	57800	Pentatricopeptide repeat-containing protein At2g33760
Scaffold_2401	169904	Pentatricopeptide repeat-containing protein At2g33760
Scaffold_2403	149678	Unannotated
Scaffold_2403	149679	Unannotated
Scaffold_2403	153771	Unannotated
Scaffold_2403	154266	Unannotated
Scaffold_2404	156711	Unannotated
Scaffold_2404	169239	Unannotated
Scaffold_2405	86558	Unannotated
Scaffold_2406	158067	Unannotated
Scaffold_2408	35526	Unannotated
Scaffold_2408	98010	Unannotated
Scaffold_2408	158684	Unannotated
Scaffold_2408	158700	Unannotated
Scaffold_2409	31895	Unannotated
Scaffold_2409	34905	Unannotated
Scaffold_2409	105989	Unannotated
Scaffold_2417	135811	Unannotated
Scaffold_2417	135822	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_2417	139193	2-hydroxyisoflavanone synthase (2HI synthase) (EC 1.14.14.87) (CYP Ge-8) (Cytochrome P450 93C2) (Isoflavonoid synthase)
Scaffold_2419	144144	Unannotated
Scaffold_2419	144428	Unannotated
Scaffold_2422	105791	Unannotated
Scaffold_2422	126565	Probable manganese-transporting ATPase PDR2 (EC 3.6.3.-) (Protein MALE GAMETOGENESIS IMPAIRED ANTHERS) (Protein PHOSPHATE DEFICIENCY RESPONSE 2)
Scaffold_2422	126566	Unannotated
Scaffold_2422	134336	Unannotated
Scaffold_2423	110746	Unannotated
Scaffold_2426	23107	Unannotated
Scaffold_2426	105982	Protein FAR-RED ELONGATED HYPOCOTYL 3
Scaffold_2426	126051	Protein FAR-RED ELONGATED HYPOCOTYL 3
Scaffold_2426	126123	Unannotated
Scaffold_2426	139236	Unannotated
Scaffold_2428	43725	Unannotated
Scaffold_2430	44308	Unannotated
Scaffold_2430	51419	Unannotated
Scaffold_2435	79928	Unannotated
Scaffold_2435	79929	Unannotated
Scaffold_2437	48756	Unannotated
Scaffold_2437	48857	Unannotated
Scaffold_2438	2670	Unannotated
Scaffold_2438	49453	Unannotated
Scaffold_2438	50063	Unannotated
Scaffold_2438	79722	Unannotated
Scaffold_2438	80312	Unannotated
Scaffold_2438	105017	Unannotated
Scaffold_2441	26588	Unannotated
Scaffold_2444	14661	Unannotated
Scaffold_2446	103956	Unannotated
Scaffold_2448	112409	Unannotated
Scaffold_2451	116961	Unannotated
Scaffold_2453	24857	Unannotated
Scaffold_2455	55897	Unannotated
Scaffold_2455	77249	Unannotated
Scaffold_2455	78207	Uncharacterized protein At1g21580
Scaffold_2463	38175	Unannotated
Scaffold_2463	84295	Unannotated
Scaffold_2463	84296	Unannotated
Scaffold_2464	107	Unannotated
Scaffold_2464	59687	Unannotated
Scaffold_2471	105633	Unannotated
Scaffold_2471	105634	Unannotated
Scaffold_2474	57958	Unannotated
Scaffold_2476	126397	Probable leucine-rich repeat receptor-like protein kinase At5g49770 (EC 2.7.11.1)
Scaffold_2477	7992	Unannotated
Scaffold_2484	2116	Unannotated
Scaffold_2486	81556	Unannotated
Scaffold_2486	81557	Unannotated
Scaffold_2488	25209	Unannotated
Scaffold_2488	72375	Unannotated
Scaffold_2491	22406	Calcium-dependent protein kinase 19 (OsCDPK19) (OsCPK19) (EC 2.7.11.1) (Calcium-dependent protein kinase isoform 2) (OsCDPK2) (OsCPK2)
Scaffold_2492	121343	Unannotated
Scaffold_2494	100134	Unannotated
Scaffold_2498	57345	Unannotated
Scaffold_2500	102735	Unannotated
Scaffold_2501	85138	Unannotated
Scaffold_2502	85040	Unannotated
Scaffold_2505	10732	Unannotated
Scaffold_2505	10733	Unannotated
Scaffold_2509	40167	Unannotated
Scaffold_2523	74297	Unannotated
Scaffold_2525	83335	Unannotated
Scaffold_2536	69348	Unannotated
Scaffold_2536	80513	Unannotated
Scaffold_2538	38022	Unannotated
Scaffold_2538	65681	Unannotated
Scaffold_2546	44486	Unannotated
Scaffold_2546	44487	Unannotated
Scaffold_2549	13928	Unannotated
Scaffold_2549	36658	Unannotated
Scaffold_2549	73600	Unannotated
Scaffold_2553	41609	Casein kinase II subunit beta-1 (CK II beta-1)
Scaffold_2558	46720	Unannotated
Scaffold_2559	96466	Unannotated
Scaffold_2561	20329	Unannotated
Scaffold_2561	20330	Unannotated
Scaffold_2568	74789	Unannotated
Scaffold_2571	20289	Unannotated
Scaffold_2573	7245	Unannotated
Scaffold_2573	7343	UPF0603 protein OsI_019212, chloroplastic
Scaffold_2573	7345	Unannotated
Scaffold_2577	102649	Unannotated
Scaffold_2577	102650	Trans-cinnamate 4-monooxygenase (EC 1.14.14.91) (Cinnamic acid 4-hydroxylase) (C4H) (CA4H) (Cytochrome P450 73) (Cytochrome P450C4H)
Scaffold_2581	3240	Trans-cinnamate 4-monooxygenase (EC 1.14.14.91) (Cinnamic acid 4-hydroxylase) (C4H) (CA4H) (Cytochrome P450 73) (Cytochrome P450C4H)
Scaffold_2581	89471	Unannotated
Scaffold_2585	81366	Unannotated
Scaffold_2588	28389	Unannotated
Scaffold_2588	61419	Unannotated
Scaffold_2588	61462	Unannotated
Scaffold_2589	88305	Unannotated
Scaffold_2589	88306	Unannotated
Scaffold_2590	53840	Unannotated
Scaffold_2590	92113	Unannotated
Scaffold_2598	54843	Unannotated
Scaffold_2598	54983	Unannotated
Scaffold_2605	57874	Unannotated
Scaffold_2613	60173	Unannotated
Scaffold_2616	51170	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2635	853	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2641	38621	Unannotated
Scaffold_2645	90769	Unannotated
Scaffold_2646	2781	B3 domain-containing protein REM19 (Protein RELATED TO VERNALIZATION 1) (Protein REPRODUCTIVE MERISTEM 19)
Scaffold_2646	55000	Unannotated
Scaffold_2652	41779	Unannotated
Scaffold_2652	55536	Unannotated
Scaffold_2652	55537	Unannotated
Scaffold_2659	712	Unannotated
Scaffold_2669	62803	Unannotated
Scaffold_2677	138624	Unannotated
Scaffold_2678	22031	Unannotated
Scaffold_2678	167720	Unannotated
Scaffold_2678	167721	Unannotated
Scaffold_2679	178910	Unannotated
Scaffold_2681	28750	Unannotated
Scaffold_2683	80937	Unannotated
Scaffold_2683	101227	Unannotated
Scaffold_2685	78559	Unannotated
Scaffold_2686	62984	Superoxide dismutase [Mn], mitochondrial (EC 1.15.1.1)
Scaffold_2688	38533	Unannotated
Scaffold_2690	23390	Unannotated
Scaffold_2692	107240	Unannotated
Scaffold_2692	136043	Unannotated
Scaffold_2692	167485	Unannotated
Scaffold_2693	38629	Unannotated
Scaffold_2693	38630	Unannotated
Scaffold_2693	99817	Unannotated
Scaffold_2694	135396	Unannotated
Scaffold_2695	158331	Unannotated
Scaffold_2695	158431	Unannotated
Scaffold_2695	243152	Unannotated
Scaffold_2696	50775	Unannotated
Scaffold_2696	52961	Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6)
Scaffold_2697	26675	Endoglucanase 6 (EC 3.2.1.4) (Endo-1,4-beta glucanase 6)
Scaffold_2698	45587	Unannotated
Scaffold_2698	52621	Unannotated
Scaffold_2698	61391	Unannotated
Scaffold_2698	61393	Unannotated
Scaffold_2698	139519	Unannotated
Scaffold_2699	221665	Unannotated
Scaffold_2704	35852	Unannotated
Scaffold_2716	45402	Unannotated
Scaffold_2726	42685	Unannotated
Scaffold_2730	23793	Unannotated
Scaffold_2733	31614	Unannotated
Scaffold_2733	32357	Unannotated
Scaffold_2734	3094	Unannotated
Scaffold_2737	50548	Unannotated
Scaffold_2737	60031	Unannotated
Scaffold_2737	60032	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit I) (NDH subunit I) (NADH-plastoquinone oxidoreductase subunit I)
Scaffold_2742	30092	Unannotated
Scaffold_2742	63186	Unannotated
Scaffold_2747	41183	Unannotated
Scaffold_2751	41048	Unannotated
Scaffold_2751	41051	Unannotated
Scaffold_2752	8126	Unannotated
Scaffold_2755	34604	Unannotated
Scaffold_2757	7780	Unannotated
Scaffold_2758	1712	Unannotated
Scaffold_2760	17315	Unannotated
Scaffold_2763	47735	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
Scaffold_2763	47793	Unannotated
Scaffold_2763	47836	Unannotated
Scaffold_2763	48355	Unannotated
Scaffold_2779	50438	Unannotated
Scaffold_2790	24228	Unannotated
Scaffold_2790	24356	Unannotated
Scaffold_2790	24734	Unannotated
Scaffold_2790	25300	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2790	25471	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2801	1624	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2811	8954	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_2817	11325	Unannotated
Scaffold_2817	11326	Unannotated
Scaffold_2817	54277	Unannotated
Scaffold_2828	79853	Unannotated
Scaffold_2841	8630	Unannotated
Scaffold_2855	13526	Unannotated
Scaffold_2888	45435	Unannotated
Scaffold_2888	45629	Unannotated
Scaffold_2888	45660	Unannotated
Scaffold_2893	320	Unannotated
Scaffold_2901	2338	Unannotated
Scaffold_2905	45335	Unannotated
Scaffold_2908	41126	Unannotated
Scaffold_2915	14807	Unannotated
Scaffold_2917	8207	Unannotated
Scaffold_2922	47460	Unannotated
Scaffold_2930	37072	Unannotated
Scaffold_2930	37637	Unannotated
Scaffold_2938	41707	Unannotated
Scaffold_2942	25492	Photosystem II reaction center protein M (PSII-M)
Scaffold_2945	6264	Unannotated
Scaffold_2953	22199	Unannotated
Scaffold_2962	9408	Unannotated
Scaffold_2976	49730	Unannotated
Scaffold_3008	33842	Unannotated
Scaffold_3010	49640	Unannotated
Scaffold_3010	49703	Unannotated
Scaffold_3017	9085	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3017	9086	Unannotated
Scaffold_3025	45032	Unannotated
Scaffold_3027	4006	Unannotated
Scaffold_3027	4007	Unannotated
Scaffold_3039	51312	Unannotated
Scaffold_3040	26831	Unannotated
Scaffold_3046	1777	Unannotated
Scaffold_3051	5317	Unannotated
Scaffold_3061	33699	Unannotated
Scaffold_3068	32011	Unannotated
Scaffold_3068	32012	Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts 214) (AtTIC214)
Scaffold_3068	54073	Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts 214) (AtTIC214)
Scaffold_3084	47570	Heat shock 70 kDa protein 17 (Heat shock protein 70-17) (AtHsp70-17)
Scaffold_3088	24	Exportin-2 (Exp2) (Cellular apoptosis susceptibility protein homolog) (Importin-alpha re-exporter)
Scaffold_3088	44	Unannotated
Scaffold_3102	44652	Unannotated
Scaffold_3105	5794	Unannotated
Scaffold_3106	23763	Unannotated
Scaffold_3106	23764	Unannotated
Scaffold_3112	20756	Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q(B) protein)
Scaffold_3113	50184	Glutathione S-transferase U18 (AtGSTU18) (EC 2.5.1.18) (GST class-tau member 18) (Glutathione S-transferase 29)
Scaffold_3115	11464	Unannotated
Scaffold_3117	28411	Unannotated
Scaffold_3118	54586	Unannotated
Scaffold_3118	54633	Unannotated
Scaffold_3118	54825	Unannotated
Scaffold_3130	5221	Unannotated
Scaffold_3130	20489	Unannotated
Scaffold_3135	14989	Protein PsbN
Scaffold_3136	43460	Unannotated
Scaffold_3136	43484	Unannotated
Scaffold_3155	45784	Unannotated
Scaffold_3160	21697	Unannotated
Scaffold_3160	22069	Unannotated
Scaffold_3160	22118	Unannotated
Scaffold_3162	42674	Unannotated
Scaffold_3165	8021	Unannotated
Scaffold_3165	42399	Unannotated
Scaffold_3166	22150	Unannotated
Scaffold_3166	51159	ATPase family AAA domain-containing protein FIGL1 (AAA-ATPase FIDGETIN-LIKE 1) (EC 3.6.4.-)
Scaffold_3166	51161	Unannotated
Scaffold_3167	45893	Unannotated
Scaffold_3170	49669	Unannotated
Scaffold_3171	51640	Unannotated
Scaffold_3174	36056	Unannotated
Scaffold_3174	36057	Unannotated
Scaffold_3177	43224	Unannotated
Scaffold_3180	7337	Unannotated
Scaffold_3180	32907	Unannotated
Scaffold_3180	33771	Unannotated
Scaffold_3185	306	Unannotated
Scaffold_3192	66	Beta-galactosidase 3 (Lactase 3) (EC 3.2.1.23)
Scaffold_3192	182	Unannotated
Scaffold_3192	220	Unannotated
Scaffold_3199	58834	Unannotated
Scaffold_3199	58836	Unannotated
Scaffold_3204	14087	Unannotated
Scaffold_3204	14655	Unannotated
Scaffold_3209	15911	Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (AtRE2) [Includes: Protease RE2 (EC 3.4.23.-); Reverse transcriptase RE2 (EC 2.7.7.49); Endonuclease RE2]
Scaffold_3215	5298	Unannotated
Scaffold_3229	28554	Unannotated
Scaffold_3230	40419	Unannotated
Scaffold_3230	40420	Unannotated
Scaffold_3233	37059	Unannotated
Scaffold_3234	19949	Unannotated
Scaffold_3234	19950	Unannotated
Scaffold_3243	22145	Unannotated
Scaffold_3243	22273	Unannotated
Scaffold_3244	18179	Unannotated
Scaffold_3244	18206	Unannotated
Scaffold_3244	18223	Unannotated
Scaffold_3245	33306	Unannotated
Scaffold_3251	483	Probable methyltransferase PMT16 (EC 2.1.1.-)
Scaffold_3252	38984	Probable methyltransferase PMT16 (EC 2.1.1.-)
Scaffold_3264	16267	Unannotated
Scaffold_3276	42387	Unannotated
Scaffold_3279	30597	Unannotated
Scaffold_3280	15068	Unannotated
Scaffold_3283	43471	Unannotated
Scaffold_3288	6166	Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q(B) protein)
Scaffold_3288	6295	Unannotated
Scaffold_3289	36583	Unannotated
Scaffold_3297	37765	Unannotated
Scaffold_3305	20859	Unannotated
Scaffold_3307	60391	Unannotated
Scaffold_3312	18553	Unannotated
Scaffold_3327	15051	Unannotated
Scaffold_3327	42753	Unannotated
Scaffold_3336	6556	Unannotated
Scaffold_3350	30175	Unannotated
Scaffold_3360	41434	Monothiol glutaredoxin-S2 (AtGrxS2) (Protein ROXY 10)
Scaffold_3362	3416	Unannotated
Scaffold_3365	7830	Unannotated
Scaffold_3368	3903	Unannotated
Scaffold_3368	34974	Unannotated
Scaffold_3373	12884	Unannotated
Scaffold_3379	2888	Unannotated
Scaffold_3379	2889	Unannotated
Scaffold_3385	71945	Unannotated
Scaffold_3385	71947	Unannotated
Scaffold_3385	76359	Unannotated
Scaffold_3395	34774	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3396	31092	Unannotated
Scaffold_3398	42600	Unannotated
Scaffold_3398	42608	Unannotated
Scaffold_3412	2676	Unannotated
Scaffold_3412	2686	Unannotated
Scaffold_3431	18551	Unannotated
Scaffold_3442	12145	Unannotated
Scaffold_3444	18791	Unannotated
Scaffold_3444	18792	Protein CYPRO4
Scaffold_3446	4068	Unannotated
Scaffold_3446	37762	Unannotated
Scaffold_3446	37763	Unannotated
Scaffold_3446	37864	Unannotated
Scaffold_3448	53970	Unannotated
Scaffold_3461	23385	Unannotated
Scaffold_3461	23406	Unannotated
Scaffold_3463	74190	Unannotated
Scaffold_3463	74231	Unannotated
Scaffold_3463	74243	Unannotated
Scaffold_3463	74293	Unannotated
Scaffold_3463	74418	Unannotated
Scaffold_3463	75537	Unannotated
Scaffold_3463	76272	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
Scaffold_3464	24686	Ribulose bisphosphate carboxylase large chain (RuBisCO large subunit) (EC 4.1.1.39)
Scaffold_3475	42601	Unannotated
Scaffold_3475	42602	Unannotated
Scaffold_3477	57913	Unannotated
Scaffold_3480	40400	Unannotated
Scaffold_3480	40683	Unannotated
Scaffold_3487	4921	Unannotated
Scaffold_3487	17443	Unannotated
Scaffold_3487	22210	Unannotated
Scaffold_3491	20016	Unannotated
Scaffold_3503	27979	Unannotated
Scaffold_3507	68615	Unannotated
Scaffold_3507	68622	Unannotated
Scaffold_3508	17285	Unannotated
Scaffold_3508	17286	Unannotated
Scaffold_3512	33526	Unannotated
Scaffold_3516	67708	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3521	48973	Unannotated
Scaffold_3529	15492	ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)
Scaffold_3533	16185	Unannotated
Scaffold_3533	16186	Unannotated
Scaffold_3536	34071	Unannotated
Scaffold_3544	66425	Unannotated
Scaffold_3545	22182	Unannotated
Scaffold_3551	3983	Unannotated
Scaffold_3555	369	Unannotated
Scaffold_3555	370	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3555	469	Unannotated
Scaffold_3555	470	Unannotated
Scaffold_3556	7086	Unannotated
Scaffold_3556	7087	Unannotated
Scaffold_3559	43066	Unannotated
Scaffold_3559	43654	Unannotated
Scaffold_3562	1047	Unannotated
Scaffold_3566	44569	Unannotated
Scaffold_3574	51759	Unannotated
Scaffold_3584	41898	Unannotated
Scaffold_3588	15907	Unannotated
Scaffold_3595	51980	Unannotated
Scaffold_3595	51987	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3595	52001	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3604	16226	Unannotated
Scaffold_3605	9309	Unannotated
Scaffold_3612	14521	Unannotated
Scaffold_3617	7789	Unannotated
Scaffold_3617	7795	Unannotated
Scaffold_3619	42111	Unannotated
Scaffold_3619	59689	Unannotated
Scaffold_3622	4531	Unannotated
Scaffold_3622	4534	Unannotated
Scaffold_3634	19170	Unannotated
Scaffold_3637	5995	Unannotated
Scaffold_3652	63389	Unannotated
Scaffold_3660	15786	Unannotated
Scaffold_3663	5704	Unannotated
Scaffold_3663	21302	Unannotated
Scaffold_3681	19122	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3684	32430	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3684	32469	Unannotated
Scaffold_3684	32528	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit H) (NADH-plastoquinone oxidoreductase 49 kDa subunit) (NADH-plastoquinone oxidoreductase subunit H)
Scaffold_3684	32529	Unannotated
Scaffold_3686	44925	Unannotated
Scaffold_3689	2395	Unannotated
Scaffold_3692	48109	Unannotated
Scaffold_3692	48182	Unannotated
Scaffold_3704	21835	Unannotated
Scaffold_3707	64383	Unannotated
Scaffold_3708	22907	Unannotated
Scaffold_3711	45645	Unannotated
Scaffold_3723	50967	Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1]
Scaffold_3725	36601	Unannotated
Scaffold_3726	22672	Unannotated
Scaffold_3731	29819	Unannotated
Scaffold_3733	43783	Unannotated
Scaffold_3733	44026	Unannotated
Scaffold_3749	5287	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Scaffold_3757	23298	Unannotated
Scaffold_3767	50578	Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA)
Scaffold_3771	1679	Glycosyltransferase family 92 protein RCOM_0530710 (EC 2.4.1.-)
Scaffold_3771	1680	Unannotated
Scaffold_3788	46870	Unannotated
Scaffold_3788	46919	Unannotated
Scaffold_3798	6397	Unannotated
Scaffold_3801	725	Protein Ycf2
Scaffold_3801	8058	Unannotated
Scaffold_3803	20606	Unannotated
Scaffold_3806	3894	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
Scaffold_3806	44286	Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB)
Scaffold_3814	15367	Unannotated
Scaffold_3814	15368	Unannotated
Scaffold_3824	10875	12-oxophytodienoate reductase 3 (EC 1.3.1.42) (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3)
Scaffold_3834	31307	Unannotated
Scaffold_3836	15824	Unannotated
Scaffold_3855	1134	Unannotated
Scaffold_3855	1135	Unannotated
Scaffold_3856	70144	Unannotated
Scaffold_3856	81364	Unannotated
Scaffold_3858	23883	Unannotated
Scaffold_3860	41243	Unannotated
Scaffold_3860	41343	Unannotated
Scaffold_3860	52664	Unannotated
Scaffold_3860	52764	Unannotated
Scaffold_3877	40159	Unannotated
Scaffold_3878	32176	Unannotated
Scaffold_3888	47870	Unannotated
Scaffold_3900	7588	Unannotated
Scaffold_3905	44939	Unannotated
Scaffold_3906	16574	Unannotated
Scaffold_3910	30936	Unannotated
Scaffold_3915	20955	Unannotated
Scaffold_3915	20958	Uncharacterized protein ycf68 (ORF 134)
Scaffold_3918	29208	Unannotated
Scaffold_3922	19832	Unannotated
Scaffold_3929	48719	Unannotated
Scaffold_3929	48724	Unannotated
Scaffold_3933	30962	Unannotated
Scaffold_3934	12354	Unannotated
Scaffold_3934	41852	Unannotated
Scaffold_3934	41853	Unannotated
Scaffold_3948	6535	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1)
Scaffold_3949	9325	Unannotated
Scaffold_3949	9750	Unannotated
Scaffold_3954	58927	Unannotated
Scaffold_3954	58937	Unannotated
Scaffold_3956	56150	Unannotated
Scaffold_3956	56152	Unannotated
Scaffold_3957	17379	Unannotated
Scaffold_3961	8239	Protein transport protein SEC16A homolog (Protein MAIGO 5)
Scaffold_3971	25186	Unannotated
Scaffold_3982	26300	Unannotated
Scaffold_4005	48326	Unannotated
Scaffold_4006	35056	Unannotated
Scaffold_4013	19078	Unannotated
Scaffold_4014	42533	Unannotated
Scaffold_4014	42633	Unannotated