| SNPs Id | Position | Function |
| Scaffold_3380 | 27408 | Unannotated |
| Scaffold_3385 | 69291 | Unannotated |
| Scaffold_3385 | 74469 | Unannotated |
| Scaffold_3398 | 43043 | Unannotated |
| Scaffold_3402 | 26583 | Unannotated |
| Scaffold_3404 | 29167 | Unannotated |
| Scaffold_3408 | 55659 | Unannotated |
| Scaffold_3431 | 18507 | Unannotated |
| Scaffold_3432 | 18912 | Unannotated |
| Scaffold_3436 | 8963 | Unannotated |
| Scaffold_3436 | 9048 | Unannotated |
| Scaffold_3440 | 13758 | Unannotated |
| Scaffold_3446 | 36086 | Unannotated |
| Scaffold_3446 | 38339 | Unannotated |
| Scaffold_3451 | 122 | Ankyrin repeat protein SKIP35 (SKP1-interacting partner 35) |
| Scaffold_3452 | 2225 | Unannotated |
| Scaffold_3461 | 55285 | Unannotated |
| Scaffold_3463 | 68692 | Unannotated |
| Scaffold_3463 | 73480 | Unannotated |
| Scaffold_3463 | 73552 | NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase, subunit 2 B) (NADH-plastoquinone oxidoreductase subunit 2 B) |