| SNPs Id | Position | Function |
| Scaffold_16 | 853477 | Unannotated |
| Scaffold_16 | 865260 | Unannotated |
| Scaffold_16 | 1299646 | Unannotated |
| Scaffold_16 | 1309491 | Unannotated |
| Scaffold_16 | 1515913 | Unannotated |
| Scaffold_16 | 1871457 | Unannotated |
| Scaffold_16 | 1914126 | Unannotated |
| Scaffold_16 | 1915448 | Unannotated |
| Scaffold_16 | 1934774 | Unannotated |
| Scaffold_17 | 282147 | Unannotated |
| Scaffold_17 | 600452 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_17 | 677468 | Unannotated |
| Scaffold_17 | 967397 | Unannotated |
| Scaffold_17 | 971909 | Unannotated |
| Scaffold_17 | 972132 | Unannotated |
| Scaffold_17 | 1025551 | Unannotated |
| Scaffold_17 | 1068020 | Unannotated |
| Scaffold_17 | 1068021 | Unannotated |
| Scaffold_17 | 1360678 | Serine/threonine-protein kinase BRI1-like 1 (EC 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) |
| Scaffold_17 | 1360679 | Unannotated |