| SNPs Id | Position | Function |
| Scaffold_80 | 65263 | Unannotated |
| Scaffold_80 | 65436 | Unannotated |
| Scaffold_83 | 140153 | Unannotated |
| Scaffold_84 | 191527 | ENHANCER OF AG-4 protein 2 (Protein AERIAL ROSETTE 1) |
| Scaffold_85 | 3750 | Unannotated |
| Scaffold_85 | 10348 | Unannotated |
| Scaffold_85 | 58752 | Unannotated |
| Scaffold_86 | 246360 | DNA-directed RNA polymerase D subunit 2b (AtNRPD2b) (Nuclear RNA polymerase D 2b) (EC 2.7.7.6) (RNA polymerase IV subunit 2b) (POL IV 2b) |
| Scaffold_87 | 200271 | Unannotated |
| Scaffold_87 | 200272 | Unannotated |
| Scaffold_88 | 201547 | Unannotated |
| Scaffold_88 | 233873 | Unannotated |
| Scaffold_89 | 10626 | Unannotated |
| Scaffold_89 | 213703 | Unannotated |
| Scaffold_89 | 238133 | Unannotated |
| Scaffold_90 | 33303 | ATP synthase subunit gamma, mitochondrial (F-ATPase gamma subunit) |
| Scaffold_90 | 168881 | Unannotated |
| Scaffold_91 | 19749 | Unannotated |
| Scaffold_91 | 63708 | Pre-mRNA-processing protein 40A (Mediator of RNA polymerase II transcription subunit 35a) |
| Scaffold_91 | 88551 | Unannotated |