| SNPs Id | Position | Function |
| Scaffold_101 | 367170 | Unannotated |
| Scaffold_102 | 2467 | Unannotated |
| Scaffold_102 | 266973 | Unannotated |
| Scaffold_102 | 267276 | Unannotated |
| Scaffold_102 | 267277 | Unannotated |
| Scaffold_102 | 402519 | Uncharacterized protein At5g39865 |
| Scaffold_104 | 33685 | Unannotated |
| Scaffold_104 | 123066 | Zinc-finger homeodomain protein 9 (AtZHD9) (Homeobox protein 34) (AtHB-34) |
| Scaffold_104 | 126562 | Purple acid phosphatase 8 (EC 3.1.3.2) |
| Scaffold_104 | 178800 | Unannotated |
| Scaffold_105 | 61088 | Unannotated |
| Scaffold_105 | 61089 | Unannotated |
| Scaffold_105 | 61853 | Unannotated |
| Scaffold_105 | 464797 | Unannotated |
| Scaffold_106 | 55881 | Unannotated |
| Scaffold_106 | 169367 | Protein NBR1 homolog (AtNBR1) (At4g24690) |
| Scaffold_106 | 267532 | Unannotated |
| Scaffold_106 | 389776 | Unannotated |
| Scaffold_106 | 392092 | Stromal 70 kDa heat shock-related protein, chloroplastic |
| Scaffold_107 | 285797 | Stromal 70 kDa heat shock-related protein, chloroplastic |