| SNPs Id | Position | Function |
| Scaffold_427 | 50806 | Zinc finger protein ZAT4 |
| Scaffold_450 | 35216 | Unannotated |
| Scaffold_464 | 9028 | Unannotated |
| Scaffold_471 | 52558 | Unannotated |
| Scaffold_477 | 8471 | Unannotated |
| Scaffold_492 | 30509 | Unannotated |
| Scaffold_492 | 30510 | Ubiquitin-activating enzyme E1 1 (AtUBA1) (EC 6.2.1.45) (Protein MODIFIER OF SNC1 5) |
| Scaffold_492 | 44782 | Ubiquitin-activating enzyme E1 1 (AtUBA1) (EC 6.2.1.45) (Protein MODIFIER OF SNC1 5) |
| Scaffold_494 | 49714 | Ubiquitin-activating enzyme E1 1 (AtUBA1) (EC 6.2.1.45) (Protein MODIFIER OF SNC1 5) |
| Scaffold_495 | 51517 | Unannotated |
| Scaffold_496 | 2005 | Unannotated |
| Scaffold_496 | 2006 | Unannotated |
| Scaffold_496 | 26414 | Unannotated |
| Scaffold_512 | 47967 | Unannotated |
| Scaffold_513 | 21400 | Unannotated |
| Scaffold_523 | 28467 | Unannotated |
| Scaffold_535 | 47115 | UV-B-induced protein At3g17800, chloroplastic |
| Scaffold_537 | 6293 | Unannotated |
| Scaffold_537 | 31834 | Unannotated |
| Scaffold_538 | 31494 | Unannotated |