| SNPs Id | Position | Function |
| Scaffold_1514 | 27567 | Unannotated |
| Scaffold_1539 | 5675 | Unannotated |
| Scaffold_1597 | 31409 | Unannotated |
| Scaffold_1644 | 15656 | Unannotated |
| Scaffold_1675 | 13833 | Unannotated |
| Scaffold_1675 | 13834 | Unannotated |
| Scaffold_1684 | 5267 | Unannotated |
| Scaffold_1693 | 43127 | Unannotated |
| Scaffold_1698 | 40609 | Unannotated |
| Scaffold_1772 | 29842 | Protease Do-like 1, chloroplastic (EC 3.4.21.-) (Protein DEGRADATION OF PERIPLASMIC PROTEINS 1) (DEGP PROTEASE 1) |
| Scaffold_1779 | 4469 | Unannotated |
| Scaffold_1788 | 7011 | Unannotated |
| Scaffold_1798 | 18677 | Unannotated |
| Scaffold_1821 | 28815 | Unannotated |
| Scaffold_1827 | 7013 | Unannotated |
| Scaffold_1840 | 38599 | Unannotated |
| Scaffold_1900 | 18017 | 40S ribosomal protein S4 |
| Scaffold_1902 | 2226 | Unannotated |
| Scaffold_1928 | 11932 | Unannotated |
| Scaffold_2005 | 14119 | Unannotated |