| SNPs Id | Position | Function |
| Scaffold_2 | 1554972 | Unannotated |
| Scaffold_2 | 1576051 | Unannotated |
| Scaffold_2 | 2113543 | Unannotated |
| Scaffold_2 | 2169013 | Unannotated |
| Scaffold_2 | 2302711 | Unannotated |
| Scaffold_2 | 2428097 | Receptor-like protein 53 (AtRLP53) |
| Scaffold_2 | 2447843 | Unannotated |
| Scaffold_2 | 2584104 | Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Tripeptidyl-peptidase II) (TPPII) |
| Scaffold_2 | 2708764 | Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Tripeptidyl-peptidase II) (TPPII) |
| Scaffold_4 | 243953 | Unannotated |
| Scaffold_4 | 688832 | Unannotated |
| Scaffold_4 | 858777 | Unannotated |
| Scaffold_4 | 923823 | Unannotated |
| Scaffold_4 | 947117 | Unannotated |
| Scaffold_4 | 1105082 | Unannotated |
| Scaffold_4 | 1777960 | Unannotated |
| Scaffold_4 | 2291954 | Pentatricopeptide repeat-containing protein At1g32415, mitochondrial |
| Scaffold_5 | 178401 | Unannotated |
| Scaffold_5 | 505206 | Unannotated |
| Scaffold_5 | 909987 | Unannotated |