| SNPs Id | Position | Function |
| Scaffold_27 | 1193743 | Unannotated |
| Scaffold_27 | 1223773 | Eukaryotic translation initiation factor 3 subunit B (eIF3b) (eIF-3-eta) (eIF3 p110) |
| Scaffold_27 | 1349226 | Unannotated |
| Scaffold_27 | 1436286 | Unannotated |
| Scaffold_27 | 1550907 | FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) |
| Scaffold_27 | 1558969 | FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) |
| Scaffold_27 | 1571597 | Unannotated |
| Scaffold_27 | 1808293 | Unannotated |
| Scaffold_28 | 67483 | Unannotated |
| Scaffold_28 | 150339 | Unannotated |
| Scaffold_28 | 369694 | Unannotated |
| Scaffold_28 | 453305 | Unannotated |
| Scaffold_28 | 464859 | Unannotated |
| Scaffold_28 | 464871 | Protein EXORDIUM-like 3 |
| Scaffold_28 | 496553 | Unannotated |
| Scaffold_28 | 573289 | Unannotated |
| Scaffold_28 | 575682 | Unannotated |
| Scaffold_28 | 938779 | Unannotated |
| Scaffold_28 | 1592914 | Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.4.19.12) (Deubiquitinating enzyme 2) (AtUBP2) (Ubiquitin thioesterase 2) (Ubiquitin-specific-processing protease 2) |
| Scaffold_28 | 1728353 | Probable polyamine oxidase 4 (AtPAO4) (EC 1.5.3.16) (Amine oxidase 2) |