| SNPs Id | Position | Function |
| Scaffold_28 | 1782314 | Unannotated |
| Scaffold_29 | 196255 | Unannotated |
| Scaffold_29 | 198860 | Unannotated |
| Scaffold_29 | 291959 | Unannotated |
| Scaffold_29 | 318816 | Unannotated |
| Scaffold_29 | 318885 | Unannotated |
| Scaffold_29 | 320717 | Unannotated |
| Scaffold_29 | 344412 | Unannotated |
| Scaffold_29 | 503760 | Glycerophosphodiester phosphodiesterase GDPD2 (EC 3.1.4.46) (Glycerophosphodiester phosphodiesterase 2) (AtGDPD2) |
| Scaffold_29 | 597583 | Unannotated |
| Scaffold_29 | 597584 | Unannotated |
| Scaffold_29 | 599943 | Unannotated |
| Scaffold_29 | 787611 | Unannotated |
| Scaffold_29 | 908150 | Unannotated |
| Scaffold_29 | 1199722 | Unannotated |
| Scaffold_29 | 1309427 | Unannotated |
| Scaffold_29 | 1342006 | Pentatricopeptide repeat-containing protein At2g15690, mitochondrial |
| Scaffold_29 | 1483017 | Unannotated |
| Scaffold_29 | 1496595 | Unannotated |
| Scaffold_29 | 1509581 | Unannotated |