| SNPs Id | Position | Function |
| Scaffold_31 | 867438 | Unannotated |
| Scaffold_31 | 1214417 | Unannotated |
| Scaffold_31 | 1564305 | Unannotated |
| Scaffold_32 | 48321 | Unannotated |
| Scaffold_32 | 136591 | Unannotated |
| Scaffold_32 | 585631 | Unannotated |
| Scaffold_32 | 610735 | Unannotated |
| Scaffold_32 | 979584 | Unannotated |
| Scaffold_32 | 983368 | Unannotated |
| Scaffold_32 | 1171117 | Unannotated |
| Scaffold_32 | 1277759 | Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 (SDH) (EC 1.-.-.-) |
| Scaffold_33 | 103157 | Kinesin-like protein KIN-13B (AtKINESIN-13B) (AtKIN13B) |
| Scaffold_33 | 221192 | Unannotated |
| Scaffold_33 | 898179 | Unannotated |
| Scaffold_33 | 947150 | Unannotated |
| Scaffold_33 | 968559 | Unannotated |
| Scaffold_33 | 1010818 | Unannotated |
| Scaffold_33 | 1012074 | Unannotated |
| Scaffold_33 | 1058068 | Unannotated |
| Scaffold_33 | 1064691 | Unannotated |