| SNPs Id | Position | Function |
| Scaffold_40 | 1167436 | Unannotated |
| Scaffold_40 | 1167437 | Unannotated |
| Scaffold_40 | 1367795 | Scarecrow-like protein 13 (AtSCL13) (GRAS family protein 24) (AtGRAS-24) |
| Scaffold_40 | 1367796 | Unannotated |
| Scaffold_40 | 1404719 | Unannotated |
| Scaffold_40 | 1409130 | Unannotated |
| Scaffold_41 | 764157 | Unannotated |
| Scaffold_41 | 788008 | Unannotated |
| Scaffold_41 | 798106 | Unannotated |
| Scaffold_41 | 932760 | Unannotated |
| Scaffold_41 | 1385908 | Unannotated |
| Scaffold_41 | 1753523 | Unannotated |
| Scaffold_41 | 1792742 | Unannotated |
| Scaffold_41 | 1792823 | Unannotated |
| Scaffold_42 | 60358 | Unannotated |
| Scaffold_42 | 99937 | Unannotated |
| Scaffold_42 | 100037 | Unannotated |
| Scaffold_42 | 163314 | Unannotated |
| Scaffold_42 | 304029 | Unannotated |
| Scaffold_42 | 305349 | Unannotated |