| SNPs Id | Position | Function |
| Scaffold_55 | 199364 | Unannotated |
| Scaffold_55 | 200197 | Unannotated |
| Scaffold_55 | 233455 | Unannotated |
| Scaffold_55 | 267328 | Unannotated |
| Scaffold_55 | 286653 | Unannotated |
| Scaffold_55 | 853492 | Unannotated |
| Scaffold_55 | 920315 | Probable LRR receptor-like serine/threonine-protein kinase At1g74360 (EC 2.7.11.1) |
| Scaffold_55 | 936310 | Unannotated |
| Scaffold_55 | 951566 | Unannotated |
| Scaffold_55 | 953763 | Unannotated |
| Scaffold_55 | 978000 | Unannotated |
| Scaffold_55 | 1001445 | Ribonuclease III domain-containing protein RNC1, chloroplastic (Chloroplast ribonuclease III domain protein) |
| Scaffold_55 | 1002212 | Unannotated |
| Scaffold_55 | 1017720 | Unannotated |
| Scaffold_55 | 1040821 | Unannotated |
| Scaffold_55 | 1229238 | Unannotated |
| Scaffold_55 | 1248397 | Unannotated |
| Scaffold_56 | 97731 | Unannotated |
| Scaffold_56 | 168865 | Unannotated |
| Scaffold_56 | 457940 | Unannotated |