| SNPs Id | Position | Function |
| Scaffold_121 | 38461 | Unannotated |
| Scaffold_121 | 114837 | Unannotated |
| Scaffold_121 | 114937 | Unannotated |
| Scaffold_121 | 396451 | Unannotated |
| Scaffold_122 | 149825 | Unannotated |
| Scaffold_122 | 149826 | 3-isopropylmalate dehydratase large subunit, chloroplastic (EC 4.2.1.33) (AtLEUC) (Isopropylmalate isomerase large subunit 1) (AtIIL1) |
| Scaffold_122 | 152887 | Unannotated |
| Scaffold_122 | 174070 | Unannotated |
| Scaffold_122 | 283690 | Unannotated |
| Scaffold_122 | 322415 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (EC 2.7.11.1) (Protein BARELY ANY MERISTEM 3) |
| Scaffold_122 | 361774 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 (EC 2.7.11.1) (Protein BARELY ANY MERISTEM 3) |
| Scaffold_122 | 402697 | Unannotated |
| Scaffold_122 | 418202 | Unannotated |
| Scaffold_123 | 311366 | Unannotated |
| Scaffold_123 | 408286 | Calcium-binding protein CP1 (NaCl-inducible Ca2+-binding protein) (AtCP1) |
| Scaffold_123 | 465894 | Unannotated |
| Scaffold_123 | 478993 | Phosphatidylinositol 4-kinase gamma 4 (AtPI4Kgamma4) (PI-4Kgamma4) (PI4K gamma 4) (EC 2.7.1.67) (Ubiquitin-like domain kinase gamma 4) (UbDK gamma 4) |
| Scaffold_124 | 209643 | GDP-L-galactose phosphorylase 1 (EC 2.7.7.69) (Protein VITAMIN C DEFECTIVE 2) |
| Scaffold_125 | 77228 | Unannotated |
| Scaffold_125 | 80362 | Linoleate 13S-lipoxygenase 2-1, chloroplastic (EC 1.13.11.12) (Lipoxygenase 2-1) |