| SNPs Id | Position | Function |
| Scaffold_206 | 75685 | Unannotated |
| Scaffold_208 | 29785 | Unannotated |
| Scaffold_210 | 39359 | Unannotated |
| Scaffold_210 | 53708 | Unannotated |
| Scaffold_211 | 35282 | Unannotated |
| Scaffold_211 | 35283 | Unannotated |
| Scaffold_214 | 1933 | Unannotated |
| Scaffold_224 | 69023 | Unannotated |
| Scaffold_231 | 73257 | Unannotated |
| Scaffold_234 | 1304 | Disease resistance protein RPP13 (Resistance to Peronospora parasitica protein 13) |
| Scaffold_237 | 17498 | Rab escort protein 1 (AthREP) |
| Scaffold_237 | 70960 | Unannotated |
| Scaffold_239 | 1274 | Unannotated |
| Scaffold_239 | 75654 | Unannotated |
| Scaffold_240 | 26101 | Unannotated |
| Scaffold_243 | 15764 | Unannotated |
| Scaffold_245 | 61120 | Unannotated |
| Scaffold_246 | 33232 | Extra-large guanine nucleotide-binding protein 1 (Extra-large GTP-binding protein 1) (Extra-large G-protein 1) |
| Scaffold_251 | 83845 | Unannotated |
| Scaffold_252 | 9978 | Lysine-specific demethylase JMJ30 (AtJMJ30) (EC 1.14.11.-) (JmjC domain-containing protein 30) (Jumonji domain-containing protein 5) (AtJMJD5) |