| SNPs Id | Position | Function |
| Scaffold_741 | 10346 | Unannotated |
| Scaffold_744 | 11603 | Unannotated |
| Scaffold_747 | 7987 | Unannotated |
| Scaffold_747 | 8060 | Unannotated |
| Scaffold_747 | 8117 | CDPK-related kinase 1 (AtCRK1) (EC 2.7.11.1) (Calcium/calmodulin-dependent protein kinase 3) (Calmodulin-binding protein kinase 3) (AtCBK3) (CaM-binding protein kinase 3) |
| Scaffold_751 | 25121 | Unannotated |
| Scaffold_751 | 25143 | Unannotated |
| Scaffold_762 | 29822 | tRNA(adenine(34)) deaminase, chloroplastic (TADA) (EC 3.5.4.33) (tRNA adenosine deaminase arginine) (tRNA arginine adenosine deaminase) |
| Scaffold_764 | 56393 | Unannotated |
| Scaffold_767 | 7118 | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 (EC 2.4.1.15) (Trehalose-6-phosphate synthase 1) (AtTPS1) |
| Scaffold_767 | 21569 | Unannotated |
| Scaffold_768 | 27871 | Unannotated |
| Scaffold_793 | 64371 | Unannotated |
| Scaffold_798 | 63375 | Probable serine/threonine-protein kinase PBL19 (EC 2.7.11.1) (PBS1-like protein 19) |
| Scaffold_805 | 52390 | Probable serine/threonine-protein kinase PBL19 (EC 2.7.11.1) (PBS1-like protein 19) |
| Scaffold_818 | 29317 | Unannotated |
| Scaffold_837 | 55674 | Unannotated |
| Scaffold_840 | 42040 | Unannotated |
| Scaffold_840 | 42610 | Unannotated |
| Scaffold_849 | 4788 | Unannotated |