| SNPs Id | Position | Function |
| Scaffold_2802 | 42907 | Unannotated |
| Scaffold_2808 | 2519 | Unannotated |
| Scaffold_2809 | 5073 | Unannotated |
| Scaffold_2811 | 8356 | Unannotated |
| Scaffold_2839 | 7192 | Unannotated |
| Scaffold_2839 | 22134 | Unannotated |
| Scaffold_2840 | 10724 | Unannotated |
| Scaffold_2849 | 6856 | Unannotated |
| Scaffold_2849 | 47774 | Unannotated |
| Scaffold_2849 | 47800 | Nuclear pore complex protein NUP1 (Nuclear pore complex protein NUP136) (Nucleoporin 1) (Nucleoporin 136) |
| Scaffold_2856 | 16928 | Unannotated |
| Scaffold_2866 | 22085 | Unannotated |
| Scaffold_2880 | 34270 | Unannotated |
| Scaffold_2881 | 64128 | Unannotated |
| Scaffold_2882 | 25358 | Acetolactate synthase small subunit 1, chloroplastic (Acetohydroxy-acid synthase small subunit) (AHAS) (ALS) (Protein valine-tolerant 1) |
| Scaffold_2882 | 27885 | Unannotated |
| Scaffold_2885 | 681 | Unannotated |
| Scaffold_2888 | 45593 | Unannotated |
| Scaffold_2888 | 45667 | Unannotated |
| Scaffold_2890 | 48151 | 50S ribosomal protein L36, chloroplastic |