| SNPs Id | Position | Function |
| Scaffold_181 | 684526 | Auxin transport protein BIG (Protein ATTENUATED SHADE AVOIDANCE 1) (Protein CORYMBOSA1) (Protein DARK OVER-EXPRESSION OF CAB 1) (Protein LOW PHOSPHATE-RESISTANT ROOT 1) (Protein TRANSPORT INHIBITOR RESPONSE 3) (Protein UMBRELLA 1) |
| Scaffold_58 | 737152 | Calmodulin-binding transcription activator 4 (AtCAMTA4) (AtFIN21) (Ethylene-induced calmodulin-binding protein 4) (EICBP4) (Ethylene-induced calmodulin-binding protein d) (EICBP.d) (Signal-responsive protein 5) (AtSR5) |
| Scaffold_27 | 817980 | FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) |
| Scaffold_27 | 818151 | FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) |
| Scaffold_27 | 819894 | FACT complex subunit SPT16 (Facilitates chromatin transcription complex subunit SPT16) |
| Scaffold_2496 | 107875 | Hsp70-Hsp90 organizing protein 1 (AtHop1) (Stress-induced-phosphoprotein 1) (STI1) |
| Scaffold_2496 | 107905 | Hsp70-Hsp90 organizing protein 1 (AtHop1) (Stress-induced-phosphoprotein 1) (STI1) |
| Scaffold_6 | 128547 | Protein TRANSPORT INHIBITOR RESPONSE 1 (Weak ethylene-insensitive protein 1) |
| Scaffold_40 | 481590 | Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic (ABC transporter I family member 14) (ABC transporter ABCI.14) (AtABCI14) |
| Scaffold_10 | 630996 | Transcription termination factor MTERF6, chloroplastic/mitochondrial (Mitochondrial transcription termination factor 6) (Protein PIGMENT DEFECTIVE 191) |
| Scaffold_87 | 21914 | Zinc finger CCCH domain-containing protein 24 (AtC3H24) (EC 2.1.1.-) |
| Scaffold_2 | 495180 | Unannotated |
| Scaffold_2 | 495225 | Unannotated |
| Scaffold_2 | 677357 | Unannotated |
| Scaffold_2 | 694952 | Unannotated |
| Scaffold_2 | 695418 | Unannotated |
| Scaffold_2 | 736849 | Cytochrome c-type biogenesis protein CcmE homolog, mitochondrial (Cytochrome c maturation protein E homolog) (AtCCME) (Heme chaperone CcmE homolog) |
| Scaffold_2 | 864348 | Unannotated |
| Scaffold_2 | 929152 | Unannotated |
| Scaffold_2 | 1028848 | Unannotated |