| SNPs Id | Position | Function |
| Scaffold_2570 | 100390 | Unannotated |
| Scaffold_2571 | 14098 | Unannotated |
| Scaffold_2571 | 14130 | Unannotated |
| Scaffold_2571 | 69135 | Unannotated |
| Scaffold_2571 | 70681 | Unannotated |
| Scaffold_2573 | 7561 | Unannotated |
| Scaffold_2576 | 61223 | Unannotated |
| Scaffold_2577 | 102407 | Unannotated |
| Scaffold_2579 | 45452 | Unannotated |
| Scaffold_2580 | 19183 | F-box protein At5g39450 |
| Scaffold_2583 | 8797 | Unannotated |
| Scaffold_2585 | 33506 | CLP protease regulatory subunit CLPX3, mitochondrial |
| Scaffold_2585 | 72281 | Unannotated |
| Scaffold_2587 | 15590 | Unannotated |
| Scaffold_2589 | 85660 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_2589 | 85694 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_2590 | 54150 | Unannotated |
| Scaffold_2591 | 90695 | Unannotated |
| Scaffold_2593 | 41874 | Aquaporin PIP2-7 (Plasma membrane intrinsic protein 2-7) (ZmPIP2-7) (ZmPIP2;7) |
| Scaffold_2593 | 73265 | Unannotated |