| SNPs Id | Position | Function |
| Scaffold_2805 | 24963 | Unannotated |
| Scaffold_2805 | 25134 | Unannotated |
| Scaffold_2807 | 17380 | Unannotated |
| Scaffold_2807 | 17391 | Unannotated |
| Scaffold_2807 | 18017 | Unannotated |
| Scaffold_2809 | 5790 | Unannotated |
| Scaffold_2809 | 6017 | Unannotated |
| Scaffold_2809 | 6135 | Unannotated |
| Scaffold_2809 | 6218 | Unannotated |
| Scaffold_2809 | 6411 | Unannotated |
| Scaffold_2812 | 58983 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_2812 | 59205 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_2820 | 23800 | Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic (EC 3.6.3.3) (EC 3.6.3.5) (Protein HEAVY METAL ATPASE 1) |
| Scaffold_2820 | 24008 | Unannotated |
| Scaffold_2831 | 18368 | Unannotated |
| Scaffold_2831 | 25175 | Unannotated |
| Scaffold_2831 | 25259 | Unannotated |
| Scaffold_2831 | 25285 | Unannotated |
| Scaffold_2831 | 25791 | Unannotated |
| Scaffold_2831 | 25894 | Unannotated |