| SNPs Id | Position | Function |
| Scaffold_2944 | 49906 | Unannotated |
| Scaffold_2947 | 31023 | Unannotated |
| Scaffold_2953 | 5391 | Unannotated |
| Scaffold_2963 | 7236 | Unannotated |
| Scaffold_2967 | 50451 | Unannotated |
| Scaffold_2967 | 50466 | Unannotated |
| Scaffold_2967 | 50907 | Unannotated |
| Scaffold_2967 | 50941 | Unannotated |
| Scaffold_2968 | 39942 | Unannotated |
| Scaffold_2971 | 7940 | Unannotated |
| Scaffold_2971 | 35847 | ATP-dependent zinc metalloprotease FTSH 12, chloroplastic (AtFTSH12) (EC 3.4.24.-) |
| Scaffold_2972 | 41518 | Unannotated |
| Scaffold_2974 | 26260 | Unannotated |
| Scaffold_2979 | 20884 | Unannotated |
| Scaffold_2984 | 48239 | Unannotated |
| Scaffold_2987 | 2892 | Unannotated |
| Scaffold_2991 | 47142 | Unannotated |
| Scaffold_2991 | 47145 | Unannotated |
| Scaffold_2991 | 47207 | Unannotated |
| Scaffold_2991 | 47301 | Unannotated |