| SNPs Id | Position | Function |
| Scaffold_3108 | 44980 | Unannotated |
| Scaffold_3109 | 20 | Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) |
| Scaffold_3109 | 820 | Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit) |
| Scaffold_3109 | 8408 | Unannotated |
| Scaffold_3112 | 20708 | Unannotated |
| Scaffold_3113 | 50322 | DNA-directed RNA polymerase subunit alpha (PEP) (EC 2.7.7.6) (Plastid-encoded RNA polymerase subunit alpha) (RNA polymerase subunit alpha) |
| Scaffold_3115 | 11263 | Unannotated |
| Scaffold_3115 | 11893 | Unannotated |
| Scaffold_3115 | 12488 | Unannotated |
| Scaffold_3115 | 12579 | Unannotated |
| Scaffold_3115 | 12879 | RNA-directed DNA polymerase homolog (EC 2.7.7.48) (Reverse transcriptase homolog) |
| Scaffold_3115 | 13359 | Uncharacterized mitochondrial protein AtMg00860 (ORF158) |
| Scaffold_3115 | 13860 | Unannotated |
| Scaffold_3115 | 14033 | Unannotated |
| Scaffold_3115 | 14075 | Unannotated |
| Scaffold_3115 | 14294 | Unannotated |
| Scaffold_3115 | 14347 | Unannotated |
| Scaffold_3115 | 14736 | Unannotated |
| Scaffold_3115 | 14749 | Unannotated |
| Scaffold_3115 | 14855 | Unannotated |