| SNPs Id | Position | Function |
| Scaffold_3306 | 39345 | Unannotated |
| Scaffold_3306 | 39598 | Unannotated |
| Scaffold_3306 | 39793 | Unannotated |
| Scaffold_3306 | 40247 | Unannotated |
| Scaffold_3306 | 40327 | Unannotated |
| Scaffold_3306 | 40443 | Unannotated |
| Scaffold_3307 | 60569 | Unannotated |
| Scaffold_3312 | 7563 | Unannotated |
| Scaffold_3312 | 8861 | Unannotated |
| Scaffold_3319 | 45400 | DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'') |
| Scaffold_3321 | 33058 | Unannotated |
| Scaffold_3323 | 19173 | Trigger factor-like protein TIG, Chloroplastic (EC 5.2.1.8) (Immunophilin TIG) (Peptidyl-prolyl cis-trans isomerase TIG) (PPIase TIG) (Rotamase) |
| Scaffold_3323 | 39202 | Unannotated |
| Scaffold_3325 | 28517 | Unannotated |
| Scaffold_3325 | 37216 | Unannotated |
| Scaffold_3325 | 60813 | Unannotated |
| Scaffold_3328 | 799 | ABC transporter C family member 3 (ABC transporter ABCC.3) (AtABCC3) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 3) (Glutathione S-conjugate-transporting ATPase 3) (Multidrug resistance-associated protein 3) |
| Scaffold_3328 | 808 | ABC transporter C family member 3 (ABC transporter ABCC.3) (AtABCC3) (EC 3.6.3.44) (ATP-energized glutathione S-conjugate pump 3) (Glutathione S-conjugate-transporting ATPase 3) (Multidrug resistance-associated protein 3) |
| Scaffold_3329 | 19258 | Unannotated |
| Scaffold_3330 | 17336 | Unannotated |