| SNPs Id | Position | Function |
| Scaffold_3581 | 52483 | Unannotated |
| Scaffold_3581 | 52621 | Unannotated |
| Scaffold_3582 | 12 | Unannotated |
| Scaffold_3584 | 15192 | Unannotated |
| Scaffold_3587 | 31273 | Uncharacterized tatC-like protein ymf16 (ORFX) |
| Scaffold_3587 | 31289 | Uncharacterized tatC-like protein ymf16 (ORFX) |
| Scaffold_3588 | 15936 | Unannotated |
| Scaffold_3589 | 16592 | Unannotated |
| Scaffold_3589 | 16600 | Unannotated |
| Scaffold_3590 | 42847 | Unannotated |
| Scaffold_3594 | 21846 | 30S ribosomal protein S3, chloroplastic |
| Scaffold_3594 | 30211 | Unannotated |
| Scaffold_3595 | 12331 | Unannotated |
| Scaffold_3595 | 51882 | Unannotated |
| Scaffold_3595 | 52025 | Unannotated |
| Scaffold_3596 | 7440 | Unannotated |
| Scaffold_3596 | 7538 | Unannotated |
| Scaffold_3597 | 2734 | Unannotated |
| Scaffold_3597 | 26781 | Unannotated |
| Scaffold_3601 | 7319 | Unannotated |