| SNPs Id | Position | Function |
| Scaffold_3873 | 47874 | Unannotated |
| Scaffold_3873 | 47913 | Unannotated |
| Scaffold_3881 | 54320 | Unannotated |
| Scaffold_3881 | 54369 | Unannotated |
| Scaffold_3888 | 47865 | Unannotated |
| Scaffold_3888 | 47883 | Unannotated |
| Scaffold_3889 | 26596 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 2.1.3.15) |
| Scaffold_3889 | 26598 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 2.1.3.15) |
| Scaffold_3889 | 26747 | Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic (ACCase subunit beta) (Acetyl-CoA carboxylase carboxyltransferase subunit beta) (EC 2.1.3.15) |
| Scaffold_3892 | 52366 | Unannotated |
| Scaffold_3892 | 54476 | Unannotated |
| Scaffold_3893 | 3648 | Unannotated |
| Scaffold_3893 | 3659 | Unannotated |
| Scaffold_3893 | 3724 | Unannotated |
| Scaffold_3894 | 33748 | Unannotated |
| Scaffold_3894 | 39930 | Retrovirus-related Pol polyprotein from transposon RE2 (Retro element 2) (AtRE2) [Includes: Protease RE2 (EC 3.4.23.-); Reverse transcriptase RE2 (EC 2.7.7.49); Endonuclease RE2] |
| Scaffold_3895 | 55633 | Unannotated |
| Scaffold_3896 | 51450 | Unannotated |
| Scaffold_3898 | 7213 | Unannotated |
| Scaffold_3898 | 12323 | Unannotated |