| SNPs Id | Position | Function |
| Scaffold_16 | 852148 | Unannotated |
| Scaffold_16 | 1148547 | General transcription and DNA repair factor IIH helicase subunit XPD (TFIIH subunit XPD) (EC 3.6.4.12) (ERCC2 homolog) (RAD3 homolog) (UV hypersensitive protein 6) (AtUVH6) (XPD homolog) (AtXPD) |
| Scaffold_16 | 1171363 | Unannotated |
| Scaffold_16 | 1513807 | Unannotated |
| Scaffold_16 | 1662038 | Unannotated |
| Scaffold_17 | 14089 | Putative serine/threonine-protein kinase-like protein CCR3 (EC 2.7.11.1) (Protein CRINKLY 4 RELATED 3) (AtCRR3) |
| Scaffold_17 | 45873 | Unannotated |
| Scaffold_17 | 425975 | Serine/threonine-protein kinase BRI1-like 1 (EC 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) |
| Scaffold_17 | 646614 | Unannotated |
| Scaffold_17 | 647408 | Unannotated |
| Scaffold_17 | 795598 | Unannotated |
| Scaffold_17 | 971621 | Unannotated |
| Scaffold_17 | 971860 | Unannotated |
| Scaffold_17 | 1061310 | Unannotated |
| Scaffold_17 | 1216930 | Unannotated |
| Scaffold_17 | 1440000 | Unannotated |
| Scaffold_17 | 1440024 | Unannotated |
| Scaffold_17 | 2187690 | Unannotated |
| Scaffold_18 | 492707 | Unannotated |
| Scaffold_18 | 509933 | Unannotated |