| SNPs Id | Position | Function |
| Scaffold_29 | 391978 | Unannotated |
| Scaffold_29 | 682084 | Unannotated |
| Scaffold_29 | 908182 | Xyloglucan glycosyltransferase 4 (EC 2.4.1.-) (Cellulose synthase-like protein C4) (AtCslC4) (Xyloglucan synthase 4) |
| Scaffold_29 | 1129783 | Unannotated |
| Scaffold_29 | 1319589 | Unannotated |
| Scaffold_29 | 1319590 | Unannotated |
| Scaffold_29 | 1429381 | Unannotated |
| Scaffold_29 | 1521576 | Unannotated |
| Scaffold_30 | 128331 | Unannotated |
| Scaffold_30 | 128332 | Unannotated |
| Scaffold_30 | 151333 | Unannotated |
| Scaffold_30 | 529564 | ATP synthase delta chain, chloroplastic (F-ATPase delta chain) |
| Scaffold_30 | 620108 | Unannotated |
| Scaffold_30 | 655017 | Unannotated |
| Scaffold_30 | 696714 | Unannotated |
| Scaffold_30 | 754248 | Nuclear pore complex protein GP210 (Nuclear pore membrane glycoprotein 210) (Nucleoporin GP210) (Protein EMBRYO DEFECTIVE 3012) |
| Scaffold_30 | 1208285 | Unannotated |
| Scaffold_30 | 1233218 | Unannotated |
| Scaffold_30 | 1233473 | Unannotated |
| Scaffold_30 | 1234661 | Unannotated |