| SNPs Id | Position | Function |
| Scaffold_51 | 1535789 | Unannotated |
| Scaffold_51 | 1544779 | Unannotated |
| Scaffold_51 | 1847422 | Unannotated |
| Scaffold_51 | 1875313 | Serine decarboxylase (AtSDC) (EC 4.1.1.-) (Protein EMBRYO DEFECTIVE 1075) (Serine decarboxylase 1) (AtSDC1) |
| Scaffold_52 | 147147 | Unannotated |
| Scaffold_52 | 296187 | Unannotated |
| Scaffold_52 | 1135776 | Unannotated |
| Scaffold_52 | 1288876 | Unannotated |
| Scaffold_52 | 1589394 | ATP-dependent helicase BRM (EC 3.6.4.12) (Protein BRAHMA) (AtBRM) (Protein CHROMATIN REMODELING 2) (AtCHR2) |
| Scaffold_52 | 1604125 | Unannotated |
| Scaffold_52 | 1664296 | Unannotated |
| Scaffold_52 | 1665257 | Unannotated |
| Scaffold_52 | 1665258 | Unannotated |
| Scaffold_53 | 383646 | Unannotated |
| Scaffold_53 | 438603 | Unannotated |
| Scaffold_53 | 726548 | Unannotated |
| Scaffold_53 | 1521215 | Unannotated |
| Scaffold_54 | 217324 | Unannotated |
| Scaffold_54 | 550610 | Unannotated |
| Scaffold_54 | 614810 | Unannotated |