| SNPs Id | Position | Function |
| Scaffold_62 | 324858 | Unannotated |
| Scaffold_62 | 726471 | Unannotated |
| Scaffold_62 | 753813 | Unannotated |
| Scaffold_62 | 800645 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_62 | 832369 | Unannotated |
| Scaffold_62 | 832370 | Unannotated |
| Scaffold_62 | 1545695 | Unannotated |
| Scaffold_62 | 1566895 | Unannotated |
| Scaffold_63 | 176725 | Unannotated |
| Scaffold_63 | 278881 | Unannotated |
| Scaffold_63 | 315960 | Unannotated |
| Scaffold_63 | 322592 | Unannotated |
| Scaffold_63 | 480958 | Unannotated |
| Scaffold_63 | 546414 | Hypersensitive-induced response protein-like protein 2 |
| Scaffold_63 | 1360441 | Calmodulin-interacting protein 111 (CaM-interacting protein 111) (ATPase family AAA domain-containing protein CIP111) |
| Scaffold_64 | 37781 | Unannotated |
| Scaffold_64 | 189904 | Unannotated |
| Scaffold_64 | 517387 | Unannotated |
| Scaffold_64 | 519431 | Unannotated |
| Scaffold_64 | 975371 | Unannotated |