| SNPs Id | Position | Function |
| Scaffold_86 | 101142 | Protein TOC75, chloroplastic (75 kDa chloroplast outer envelope protein) (75 kDa translocon at the outer-envelope membrane of chloroplasts) (Import intermediate-associated protein of 75 kDa) |
| Scaffold_87 | 209178 | Unannotated |
| Scaffold_87 | 209179 | Unannotated |
| Scaffold_88 | 5525 | Unannotated |
| Scaffold_88 | 199453 | Unannotated |
| Scaffold_91 | 114616 | Unannotated |
| Scaffold_92 | 14796 | Unannotated |
| Scaffold_92 | 113996 | Aminopeptidase M1 (EC 3.4.11.2) (Alpha-aminoacylpeptide hydrolase) |
| Scaffold_93 | 207338 | Unannotated |
| Scaffold_94 | 338931 | Unannotated |
| Scaffold_96 | 133192 | Unannotated |
| Scaffold_96 | 135626 | Aldehyde dehydrogenase family 2 member B4, mitochondrial (ALDH2a) (EC 1.2.1.3) |
| Scaffold_96 | 135627 | Aldehyde dehydrogenase family 2 member B4, mitochondrial (ALDH2a) (EC 1.2.1.3) |
| Scaffold_96 | 135759 | Unannotated |
| Scaffold_96 | 366816 | Unannotated |
| Scaffold_97 | 68809 | Unannotated |
| Scaffold_98 | 107315 | Unannotated |
| Scaffold_98 | 193622 | Unannotated |
| Scaffold_99 | 29817 | Unannotated |
| Scaffold_100 | 138081 | Unannotated |