| SNPs Id | Position | Function |
| Scaffold_146 | 104199 | Unannotated |
| Scaffold_146 | 112222 | Unannotated |
| Scaffold_146 | 202943 | Unannotated |
| Scaffold_146 | 327033 | Unannotated |
| Scaffold_146 | 327034 | Unannotated |
| Scaffold_146 | 391194 | Unannotated |
| Scaffold_146 | 391195 | Unannotated |
| Scaffold_147 | 24687 | Unannotated |
| Scaffold_147 | 25009 | Unannotated |
| Scaffold_147 | 31951 | Unannotated |
| Scaffold_147 | 106715 | Unannotated |
| Scaffold_148 | 143864 | Unannotated |
| Scaffold_148 | 151359 | Beta-glucosidase 44 (AtBGLU44) (EC 3.2.1.21) |
| Scaffold_148 | 166283 | Unannotated |
| Scaffold_148 | 346858 | DNA-directed RNA polymerase subunit beta'' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta'') (RNA polymerase subunit beta'') |
| Scaffold_148 | 384972 | Mechanosensitive ion channel protein 3, chloroplastic (Mechanosensitive channel of small conductance-like 3) (MscS-Like protein 3) |
| Scaffold_148 | 450325 | Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 (pTAC10) (Plastid-encoded RNA polymerase-associated protein 3) (PEP-associated protein 3) (Protein PIGMENT DEFECTIVE 312) |
| Scaffold_149 | 392126 | Unannotated |
| Scaffold_150 | 104990 | DExH-box ATP-dependent RNA helicase DExH12 (EC 3.6.4.13) (BRR2 homolog A) (AtBRR2A) (Pre-mRNA-splicing helicase BRR2A) (Protein EMBRYO DEFECTIVE 1507) |
| Scaffold_150 | 186371 | Unannotated |