| SNPs Id | Position | Function |
| Scaffold_160 | 323018 | Unannotated |
| Scaffold_160 | 358782 | Cytochrome b6-f complex iron-sulfur subunit, chloroplastic (EC 1.10.9.1) (Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein) (Rieske iron-sulfur protein) (ISP) (RISP) |
| Scaffold_160 | 359363 | Unannotated |
| Scaffold_160 | 429948 | Unannotated |
| Scaffold_160 | 429950 | Unannotated |
| Scaffold_160 | 487533 | Unannotated |
| Scaffold_161 | 132250 | Unannotated |
| Scaffold_161 | 134181 | Unannotated |
| Scaffold_161 | 376132 | Unannotated |
| Scaffold_161 | 376301 | O-fucosyltransferase 20 (O-FucT-20) (EC 2.4.1.-) (O-fucosyltransferase family protein) |
| Scaffold_161 | 377052 | O-fucosyltransferase 37 (O-FucT-37) (EC 2.4.1.-) (O-fucosyltransferase family protein) |
| Scaffold_162 | 51248 | Unannotated |
| Scaffold_162 | 221414 | Unannotated |
| Scaffold_162 | 221419 | Unannotated |
| Scaffold_162 | 320554 | NADPH-dependent aldehyde reductase 2, chloroplastic (AtChlADR2) (EC 1.1.1.-) (Short-chain type dehydrogenase/reductase) |
| Scaffold_163 | 45498 | Unannotated |
| Scaffold_163 | 241355 | Unannotated |
| Scaffold_163 | 297760 | Unannotated |
| Scaffold_164 | 89579 | E3 ubiquitin-protein ligase UPL3 (Ubiquitin-protein ligase 3) (EC 2.3.2.26) (HECT ubiquitin-protein ligase 3) (HECT-type E3 ubiquitin transferase UPL3) (Protein KAKTUS) |
| Scaffold_164 | 89631 | E3 ubiquitin-protein ligase UPL3 (Ubiquitin-protein ligase 3) (EC 2.3.2.26) (HECT ubiquitin-protein ligase 3) (HECT-type E3 ubiquitin transferase UPL3) (Protein KAKTUS) |