| SNPs Id | Position | Function |
| Scaffold_1118 | 19129 | Unannotated |
| Scaffold_1118 | 49340 | APO protein 3, mitochondrial |
| Scaffold_1119 | 22809 | Unannotated |
| Scaffold_1126 | 55596 | Unannotated |
| Scaffold_1152 | 33577 | Unannotated |
| Scaffold_1153 | 52943 | Unannotated |
| Scaffold_1159 | 38909 | Probable disease resistance protein At4g27220 |
| Scaffold_1180 | 52408 | Unannotated |
| Scaffold_1182 | 49520 | Unannotated |
| Scaffold_1187 | 31615 | Unannotated |
| Scaffold_1194 | 15449 | Subtilisin-like protease SBT1.4 (EC 3.4.21.-) (Subtilase subfamily 1 member 4) (AtSBT1.4) |
| Scaffold_1231 | 24437 | Unannotated |
| Scaffold_1231 | 24438 | Unannotated |
| Scaffold_1250 | 23200 | Unannotated |
| Scaffold_1250 | 23288 | Unannotated |
| Scaffold_1273 | 2728 | Unannotated |
| Scaffold_1273 | 2830 | Ubiquitin-60S ribosomal protein L40 [Cleaved into: Ubiquitin; 60S ribosomal protein L40 (CEP52)] |
| Scaffold_1274 | 30388 | Unannotated |
| Scaffold_1277 | 43787 | Unannotated |
| Scaffold_1285 | 23918 | Unannotated |