| SNPs Id | Position | Function |
| Scaffold_1830 | 41263 | Unannotated |
| Scaffold_1871 | 36897 | Unannotated |
| Scaffold_1881 | 25989 | Unannotated |
| Scaffold_1890 | 40465 | Unannotated |
| Scaffold_1891 | 16334 | Unannotated |
| Scaffold_1891 | 16351 | Unannotated |
| Scaffold_1893 | 27899 | Unannotated |
| Scaffold_1910 | 820 | Unannotated |
| Scaffold_1919 | 24527 | Eukaryotic translation initiation factor 1A (eIF-1A) (Eukaryotic translation initiation factor 4C) (eIF-4C) |
| Scaffold_1921 | 41931 | Unannotated |
| Scaffold_1934 | 40076 | Unannotated |
| Scaffold_1934 | 40077 | Unannotated |
| Scaffold_1940 | 41863 | Putative disease resistance protein At5g47280 |
| Scaffold_1943 | 6056 | Unannotated |
| Scaffold_1945 | 16504 | Unannotated |
| Scaffold_1952 | 23470 | Unannotated |
| Scaffold_1959 | 6271 | Unannotated |
| Scaffold_1975 | 34981 | Unannotated |
| Scaffold_1977 | 27964 | Unannotated |
| Scaffold_1977 | 27965 | Unannotated |