| SNPs Id | Position | Function |
| Scaffold_2616 | 55069 | Unannotated |
| Scaffold_2616 | 63089 | Unannotated |
| Scaffold_2633 | 85851 | Protein MITOFERRINLIKE 1, chloroplastic (AtMFL1) |
| Scaffold_2633 | 85869 | Protein MITOFERRINLIKE 1, chloroplastic (AtMFL1) |
| Scaffold_2637 | 502 | Unannotated |
| Scaffold_2637 | 958 | Unannotated |
| Scaffold_2639 | 42503 | Magnesium-chelatase subunit ChlD, chloroplastic (Mg-chelatase subunit D) (EC 6.6.1.1) (Mg-protoporphyrin IX chelatase subunit ChlD) |
| Scaffold_2639 | 52763 | Calcium-dependent protein kinase 2 (CDPK 2) (EC 2.7.11.1) |
| Scaffold_2642 | 64466 | Unannotated |
| Scaffold_2642 | 64501 | Unannotated |
| Scaffold_2647 | 66117 | Unannotated |
| Scaffold_2648 | 41495 | Unannotated |
| Scaffold_2653 | 87346 | Unannotated |
| Scaffold_2669 | 62691 | Unannotated |
| Scaffold_2669 | 80682 | Unannotated |
| Scaffold_2672 | 39889 | Unannotated |
| Scaffold_2678 | 167927 | Unannotated |
| Scaffold_2680 | 83111 | Unannotated |
| Scaffold_2681 | 48008 | Unannotated |
| Scaffold_2681 | 55397 | Unannotated |