| SNPs Id | Position | Function |
| Scaffold_2747 | 40968 | Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB) |
| Scaffold_2747 | 41549 | Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB) |
| Scaffold_2747 | 41551 | Photosystem I P700 chlorophyll a apoprotein A2 (EC 1.97.1.12) (PSI-B) (PsaB) |
| Scaffold_2749 | 17291 | Unannotated |
| Scaffold_2749 | 50249 | Unannotated |
| Scaffold_2749 | 50261 | Unannotated |
| Scaffold_2749 | 50365 | Unannotated |
| Scaffold_2751 | 35505 | Unannotated |
| Scaffold_2752 | 8654 | Unannotated |
| Scaffold_2752 | 8655 | Unannotated |
| Scaffold_2757 | 46556 | Unannotated |
| Scaffold_2758 | 1755 | Unannotated |
| Scaffold_2763 | 48517 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_2765 | 26307 | ATP synthase subunit a, chloroplastic (ATP synthase F0 sector subunit a) (F-ATPase subunit IV) |
| Scaffold_2767 | 4855 | Unannotated |
| Scaffold_2773 | 34699 | F-box protein CPR1 (Protein CONSTITUTIVE EXPRESSER OF PR GENES 1) (Protein CONSTITUTIVE EXPRESSER OF PR GENES 30) |
| Scaffold_2775 | 32297 | Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic (EC 2.4.1.1) (Starch phosphorylase L) |
| Scaffold_2775 | 53965 | DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) |
| Scaffold_2775 | 53971 | DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) |
| Scaffold_2787 | 35049 | Photosystem II CP43 reaction center protein (PSII 43 kDa protein) (Protein CP-43) |