| SNPs Id | Position | Function |
| Scaffold_2978 | 16746 | Unannotated |
| Scaffold_2979 | 20885 | Unannotated |
| Scaffold_2985 | 4602 | Unannotated |
| Scaffold_2985 | 4608 | Unannotated |
| Scaffold_2985 | 4615 | Unannotated |
| Scaffold_2985 | 4678 | Unannotated |
| Scaffold_2985 | 4679 | Unannotated |
| Scaffold_2986 | 56394 | Unannotated |
| Scaffold_2986 | 56398 | Unannotated |
| Scaffold_2986 | 56493 | Unannotated |
| Scaffold_2991 | 47021 | Unannotated |
| Scaffold_2993 | 24110 | Unannotated |
| Scaffold_2993 | 24111 | Unannotated |
| Scaffold_3002 | 24176 | Unannotated |
| Scaffold_3005 | 28930 | 30S ribosomal protein S3, chloroplastic |
| Scaffold_3005 | 28931 | 30S ribosomal protein S3, chloroplastic |
| Scaffold_3015 | 42041 | Unannotated |
| Scaffold_3018 | 2938 | Unannotated |
| Scaffold_3022 | 42362 | Unannotated |
| Scaffold_3022 | 42364 | Unannotated |