| SNPs Id | Position | Function |
| Scaffold_3083 | 10517 | Unannotated |
| Scaffold_3083 | 40959 | Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA) |
| Scaffold_3087 | 6822 | Unannotated |
| Scaffold_3092 | 47238 | Unannotated |
| Scaffold_3093 | 42522 | Unannotated |
| Scaffold_3099 | 18145 | Unannotated |
| Scaffold_3100 | 42723 | Unannotated |
| Scaffold_3100 | 42744 | Unannotated |
| Scaffold_3100 | 42907 | Unannotated |
| Scaffold_3103 | 33164 | Unannotated |
| Scaffold_3103 | 42152 | Unannotated |
| Scaffold_3103 | 42186 | Unannotated |
| Scaffold_3103 | 42440 | Unannotated |
| Scaffold_3103 | 42690 | Unannotated |
| Scaffold_3112 | 20862 | Unannotated |
| Scaffold_3115 | 11385 | Unannotated |
| Scaffold_3115 | 11628 | Unannotated |
| Scaffold_3115 | 15179 | Unannotated |
| Scaffold_3115 | 22837 | Cytochrome b6 |
| Scaffold_3115 | 23059 | Cytochrome b6 |