| SNPs Id | Position | Function |
| Scaffold_3121 | 13671 | Unannotated |
| Scaffold_3121 | 13833 | Unannotated |
| Scaffold_3123 | 60183 | Unannotated |
| Scaffold_3124 | 58317 | O-fucosyltransferase 39 (O-FucT-39) (EC 2.4.1.-) (O-fucosyltransferase family protein) |
| Scaffold_3124 | 59055 | O-fucosyltransferase 39 (O-FucT-39) (EC 2.4.1.-) (O-fucosyltransferase family protein) |
| Scaffold_3130 | 40268 | Unannotated |
| Scaffold_3134 | 22283 | Unannotated |
| Scaffold_3138 | 21257 | Unannotated |
| Scaffold_3138 | 30114 | Unannotated |
| Scaffold_3139 | 44612 | Unannotated |
| Scaffold_3139 | 44613 | Unannotated |
| Scaffold_3139 | 44644 | Unannotated |
| Scaffold_3139 | 44708 | Unannotated |
| Scaffold_3142 | 15058 | Unannotated |
| Scaffold_3144 | 47787 | Unannotated |
| Scaffold_3147 | 1807 | ATP synthase epsilon chain, chloroplastic (ATP synthase F1 sector epsilon subunit) (F-ATPase epsilon subunit) |
| Scaffold_3149 | 13799 | Unannotated |
| Scaffold_3149 | 13816 | Unannotated |
| Scaffold_3149 | 14047 | Unannotated |
| Scaffold_3155 | 41732 | DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta') (RNA polymerase subunit beta') |