| SNPs Id | Position | Function |
| Scaffold_3156 | 19529 | Unannotated |
| Scaffold_3156 | 19530 | Unannotated |
| Scaffold_3159 | 39790 | Unannotated |
| Scaffold_3159 | 39791 | Unannotated |
| Scaffold_3160 | 5229 | NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase subunit 3) (NADH-plastoquinone oxidoreductase subunit 3) |
| Scaffold_3163 | 19958 | Unannotated |
| Scaffold_3163 | 19991 | Unannotated |
| Scaffold_3165 | 42319 | Unannotated |
| Scaffold_3165 | 42320 | Unannotated |
| Scaffold_3165 | 42356 | Unannotated |
| Scaffold_3166 | 21931 | Unannotated |
| Scaffold_3167 | 13775 | Unannotated |
| Scaffold_3167 | 13778 | Unannotated |
| Scaffold_3171 | 14205 | Unannotated |
| Scaffold_3171 | 14207 | Unannotated |
| Scaffold_3173 | 37155 | 30S ribosomal protein S2, chloroplastic |
| Scaffold_3173 | 37156 | 30S ribosomal protein S2, chloroplastic |
| Scaffold_3176 | 66833 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_3176 | 66926 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_3177 | 25794 | Puromycin-sensitive aminopeptidase (PSA) (EC 3.4.11.14) (Cytosol alanyl aminopeptidase) (AAP-S) (Meiotic prophase aminopeptidase 1) |