| SNPs Id | Position | Function |
| Scaffold_3200 | 26827 | Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II Q(B) protein) |
| Scaffold_3201 | 31405 | Unannotated |
| Scaffold_3201 | 73522 | Unannotated |
| Scaffold_3207 | 25380 | Unannotated |
| Scaffold_3208 | 39973 | Unannotated |
| Scaffold_3209 | 26802 | Unannotated |
| Scaffold_3209 | 26819 | Unannotated |
| Scaffold_3211 | 9111 | Unannotated |
| Scaffold_3213 | 20255 | Unannotated |
| Scaffold_3213 | 20420 | Unannotated |
| Scaffold_3213 | 20422 | Unannotated |
| Scaffold_3217 | 27553 | Unannotated |
| Scaffold_3217 | 34941 | Unannotated |
| Scaffold_3222 | 50225 | Unannotated |
| Scaffold_3222 | 50226 | Unannotated |
| Scaffold_3222 | 80637 | Unannotated |
| Scaffold_3222 | 80638 | Unannotated |
| Scaffold_3225 | 15435 | Unannotated |
| Scaffold_3225 | 15500 | Unannotated |
| Scaffold_3229 | 28640 | Unannotated |