| SNPs Id | Position | Function |
| Scaffold_3407 | 23119 | Unannotated |
| Scaffold_3408 | 24804 | Unannotated |
| Scaffold_3411 | 17731 | Unannotated |
| Scaffold_3411 | 18138 | Unannotated |
| Scaffold_3412 | 2677 | Unannotated |
| Scaffold_3415 | 401 | DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) (PEP) (Plastid-encoded RNA polymerase subunit beta) (RNA polymerase subunit beta) (Fragment) |
| Scaffold_3420 | 56744 | Unannotated |
| Scaffold_3425 | 14985 | Unannotated |
| Scaffold_3425 | 14989 | Unannotated |
| Scaffold_3431 | 5736 | Unannotated |
| Scaffold_3431 | 5738 | Unannotated |
| Scaffold_3431 | 18661 | Unannotated |
| Scaffold_3435 | 10704 | Unannotated |
| Scaffold_3436 | 52011 | Unannotated |
| Scaffold_3436 | 52015 | Unannotated |
| Scaffold_3438 | 45094 | Unannotated |
| Scaffold_3440 | 13763 | NAD(P)H-quinone oxidoreductase subunit 2 B, chloroplastic (EC 1.6.5.-) (NAD(P)H dehydrogenase, subunit 2 B) (NADH-plastoquinone oxidoreductase subunit 2 B) |
| Scaffold_3443 | 43891 | Unannotated |
| Scaffold_3444 | 18918 | Unannotated |
| Scaffold_3451 | 248 | Unannotated |