| SNPs Id | Position | Function |
| Scaffold_3673 | 54915 | Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA) |
| Scaffold_3673 | 54917 | Photosystem I P700 chlorophyll a apoprotein A1 (EC 1.97.1.12) (PSI-A) (PsaA) |
| Scaffold_3674 | 4134 | Unannotated |
| Scaffold_3678 | 13832 | Unannotated |
| Scaffold_3681 | 15858 | Unannotated |
| Scaffold_3681 | 16753 | Unannotated |
| Scaffold_3681 | 16765 | Unannotated |
| Scaffold_3681 | 16769 | Unannotated |
| Scaffold_3681 | 19904 | Unannotated |
| Scaffold_3683 | 32489 | Unannotated |
| Scaffold_3683 | 32490 | Unannotated |
| Scaffold_3691 | 51698 | Pyruvate kinase isozyme A, chloroplastic (EC 2.7.1.40) |
| Scaffold_3693 | 28885 | Unannotated |
| Scaffold_3694 | 4650 | Photosystem II CP47 reaction center protein (PSII 47 kDa protein) (Protein CP-47) |
| Scaffold_3695 | 49987 | Unannotated |
| Scaffold_3696 | 54550 | Unannotated |
| Scaffold_3707 | 10731 | Unannotated |
| Scaffold_3708 | 23078 | Unannotated |
| Scaffold_3708 | 23840 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_3708 | 23866 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |