| SNPs Id | Position | Function |
| Scaffold_48 | 232106 | Unannotated |
| Scaffold_48 | 232162 | Unannotated |
| Scaffold_48 | 232184 | Unannotated |
| Scaffold_48 | 232188 | Unannotated |
| Scaffold_48 | 251937 | Unannotated |
| Scaffold_48 | 251939 | Unannotated |
| Scaffold_48 | 398149 | Unannotated |
| Scaffold_48 | 557200 | Unannotated |
| Scaffold_48 | 681453 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (EC 2.7.11.1) |
| Scaffold_48 | 1127401 | Unannotated |
| Scaffold_48 | 1127402 | Unannotated |
| Scaffold_48 | 1485912 | Unannotated |
| Scaffold_48 | 1864329 | Unannotated |
| Scaffold_48 | 2182871 | Unannotated |
| Scaffold_49 | 373952 | Unannotated |
| Scaffold_49 | 437625 | Unannotated |
| Scaffold_49 | 685299 | Unannotated |
| Scaffold_49 | 794228 | Unannotated |
| Scaffold_49 | 900130 | Unannotated |
| Scaffold_49 | 1409395 | Unannotated |