| SNPs Id | Position | Function |
| Scaffold_6 | 174916 | Unannotated |
| Scaffold_6 | 414075 | Unannotated |
| Scaffold_6 | 553266 | Unannotated |
| Scaffold_6 | 715760 | Unannotated |
| Scaffold_6 | 1207608 | Unannotated |
| Scaffold_6 | 1477547 | Unannotated |
| Scaffold_6 | 1729600 | Pentatricopeptide repeat-containing protein At2g27610 |
| Scaffold_6 | 1796600 | Unannotated |
| Scaffold_6 | 1825965 | Unannotated |
| Scaffold_6 | 2076658 | Unannotated |
| Scaffold_6 | 2094052 | Unannotated |
| Scaffold_7 | 171903 | Unannotated |
| Scaffold_7 | 275380 | Unannotated |
| Scaffold_7 | 723093 | Unannotated |
| Scaffold_7 | 739502 | Unannotated |
| Scaffold_7 | 767245 | Unannotated |
| Scaffold_7 | 853601 | Unannotated |
| Scaffold_7 | 853724 | Unannotated |
| Scaffold_7 | 1008566 | Unannotated |
| Scaffold_7 | 1096060 | Unannotated |