| SNPs Id | Position | Function |
| Scaffold_139 | 272062 | Unannotated |
| Scaffold_139 | 396994 | Unannotated |
| Scaffold_139 | 396995 | Unannotated |
| Scaffold_139 | 397193 | Unannotated |
| Scaffold_140 | 120594 | Unannotated |
| Scaffold_140 | 214251 | Unannotated |
| Scaffold_140 | 215452 | Unannotated |
| Scaffold_140 | 215644 | Unannotated |
| Scaffold_140 | 216443 | Unannotated |
| Scaffold_140 | 217023 | Unannotated |
| Scaffold_140 | 219296 | Unannotated |
| Scaffold_140 | 219364 | Unannotated |
| Scaffold_140 | 372752 | UDP-D-apiose/UDP-D-xylose synthase 2 |
| Scaffold_141 | 176384 | Scarecrow-like protein 33 (AtSCL33) (GRAS family protein 12) (AtGRAS-12) |
| Scaffold_141 | 177019 | Unannotated |
| Scaffold_141 | 299298 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 303077 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 303095 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 303224 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 317122 | Unannotated |