| SNPs Id | Position | Function |
| Scaffold_141 | 317400 | Soyasaponin III rhamnosyltransferase (EC 2.4.1.273) (Soyasaponin glycosyltransferase 3) (UDP-rhamnose:soyasaponin III-rhamnosyltransferase) |
| Scaffold_141 | 411810 | Unannotated |
| Scaffold_141 | 416554 | Unannotated |
| Scaffold_141 | 418901 | Unannotated |
| Scaffold_142 | 500790 | Unannotated |
| Scaffold_142 | 529997 | Unannotated |
| Scaffold_142 | 534372 | Unannotated |
| Scaffold_142 | 534415 | Unannotated |
| Scaffold_142 | 534437 | Unannotated |
| Scaffold_142 | 534506 | Unannotated |
| Scaffold_143 | 495875 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] |
| Scaffold_144 | 19464 | Unannotated |
| Scaffold_144 | 19478 | Unannotated |
| Scaffold_144 | 274637 | Unannotated |
| Scaffold_144 | 321264 | Unannotated |
| Scaffold_144 | 387798 | Unannotated |
| Scaffold_144 | 417474 | Unannotated |
| Scaffold_144 | 418841 | Unannotated |
| Scaffold_144 | 418871 | Unannotated |
| Scaffold_144 | 447290 | Glycosyltransferase family protein 64 protein C5 (GT64 C5) (EC 2.4.1.-) |