| SNPs Id | Position | Function |
| Scaffold_183 | 18537 | Unannotated |
| Scaffold_183 | 18697 | Unannotated |
| Scaffold_185 | 34546 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_185 | 34568 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_185 | 34576 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_188 | 16571 | Unannotated |
| Scaffold_188 | 16724 | Unannotated |
| Scaffold_188 | 16725 | Unannotated |
| Scaffold_188 | 68383 | Unannotated |
| Scaffold_190 | 3760 | Unannotated |
| Scaffold_190 | 3763 | Unannotated |
| Scaffold_192 | 73409 | Unannotated |
| Scaffold_199 | 1417 | Pentatricopeptide repeat-containing protein At1g77360, mitochondrial |
| Scaffold_199 | 1690 | Pentatricopeptide repeat-containing protein At1g77360, mitochondrial |
| Scaffold_206 | 35231 | Unannotated |
| Scaffold_212 | 8266 | Unannotated |
| Scaffold_216 | 52356 | Unannotated |
| Scaffold_220 | 15619 | Unannotated |
| Scaffold_226 | 6097 | Unannotated |
| Scaffold_230 | 86170 | Unannotated |