| SNPs Id | Position | Function |
| Scaffold_591 | 32443 | Unannotated |
| Scaffold_591 | 50325 | Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II Q(B) protein) |
| Scaffold_591 | 50361 | Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II Q(B) protein) |
| Scaffold_591 | 50583 | Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II Q(B) protein) |
| Scaffold_591 | 50599 | Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (32 kDa thylakoid membrane protein) (Photosystem II Q(B) protein) |
| Scaffold_592 | 43874 | Unannotated |
| Scaffold_593 | 19766 | Unannotated |
| Scaffold_596 | 8070 | Unannotated |
| Scaffold_602 | 65056 | Unannotated |
| Scaffold_615 | 2182 | Serine/threonine-protein kinase BSK6 (EC 2.7.11.1) (Brassinosteroid-signaling kinase 6) |
| Scaffold_618 | 20765 | Unannotated |
| Scaffold_618 | 20774 | Unannotated |
| Scaffold_620 | 27050 | Unannotated |
| Scaffold_621 | 68664 | Unannotated |
| Scaffold_625 | 57756 | Unannotated |
| Scaffold_628 | 11606 | Unannotated |
| Scaffold_628 | 11711 | Unannotated |
| Scaffold_631 | 57597 | Retrovirus-related Pol polyprotein from transposon RE1 (Retro element 1) (AtRE1) [Includes: Protease RE1 (EC 3.4.23.-); Reverse transcriptase RE1 (EC 2.7.7.49); Endonuclease RE1] |
| Scaffold_634 | 61251 | Unannotated |
| Scaffold_634 | 61369 | Unannotated |