| SNPs Id | Position | Function |
| Scaffold_634 | 61382 | Unannotated |
| Scaffold_634 | 61534 | Unannotated |
| Scaffold_634 | 61604 | Unannotated |
| Scaffold_634 | 61607 | Unannotated |
| Scaffold_634 | 61651 | Unannotated |
| Scaffold_638 | 56930 | Unannotated |
| Scaffold_641 | 12917 | Aminopeptidase P1 (AtAPP1) (EC 3.4.11.9) |
| Scaffold_650 | 22662 | Unannotated |
| Scaffold_651 | 68490 | Unannotated |
| Scaffold_654 | 24251 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (EC 2.7.11.1) |
| Scaffold_662 | 20325 | Unannotated |
| Scaffold_662 | 55353 | Unannotated |
| Scaffold_666 | 41783 | Unannotated |
| Scaffold_666 | 41799 | Unannotated |
| Scaffold_666 | 42635 | Unannotated |
| Scaffold_670 | 24033 | Unannotated |
| Scaffold_672 | 30354 | Scarecrow-like protein 15 (AtSCL15) (GRAS family protein 25) (AtGRAS-25) |
| Scaffold_673 | 4168 | Unannotated |
| Scaffold_674 | 45674 | Unannotated |
| Scaffold_679 | 44623 | Unannotated |